[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : dexA
DDBJ      :dexA         putative oligo-1,6-glucosidase
Swiss-Prot:             

Homologs  Archaea  18/68 : Bacteria  604/915 : Eukaryota  122/199 : Viruses  0/175   --->[See Alignment]
c.1.8
:529 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->459 1zjaA PDBj 8e-44 35.9 %
:RPS:PDB   17->407 3bshA PDBj 2e-37 19.1 %
:RPS:SCOP  7->456 1m53A2  c.1.8.1 * 3e-50 28.9 %
:HMM:SCOP  6->456 1m53A2 c.1.8.1 * 2.2e-86 38.4 %
:RPS:PFM   40->370 PF00128 * Alpha-amylase 2e-26 42.0 %
:HMM:PFM   33->249 PF00128 * Alpha-amylase 8.2e-38 33.0 197/316  
:HMM:PFM   330->372 PF00128 * Alpha-amylase 3e-08 41.9 43/316  
:BLT:SWISS 10->411 MAL2_DROVI 5e-45 36.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69017.1 GT:GENE dexA GT:PRODUCT putative oligo-1,6-glucosidase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1615206..1616795 GB:FROM 1615206 GB:TO 1616795 GB:DIRECTION + GB:GENE dexA GB:PRODUCT putative oligo-1,6-glucosidase GB:NOTE PF00128: Alpha amylase, catalytic domain GB:PROTEIN_ID BAC69017.1 LENGTH 529 SQ:AASEQ MTSFRPAPAWLADAVFYQIYPQSFADSDGDGIGDFNGIVQRLDHLVWLGVTAVWLNPCFVSPFRDAGYDVSDYLNVAPRYGSADDLAELVDEAGRRGIRVLLDLVAGHTSDEHPWFTASANDPDDHRYIWAPEGRPDGFVTSPGTRPGAYLPNFFDTQPALNFGYGRKNPAEPWRQPVDAAGPRANREALRTIMDHWLGLGLAGFRVDMAASLVKDDPGRTETARIWTELRHWLDTAHPDAVLLSEWGEPEVSVPAGFHTDFFLQFGGATDGLPLRSLWSNGDGTVNEAWDPLDCFFDASGKGSPRPFVEAWRKASDAVGATGFVSLPTANHDFSRLNCGPRTAEQLPAAFAFQLTWPTLPAIYYGDEIGMRYVGGLPDKEGSVLGPRYNRAGSRTPMQWDDGPGAGFSTAPADRLYLPLDPSPDRPTVAAQRADDGSLLHLVRRLVALRASTPALGSGGSVEVLHTGYPFVYVRGGRYLVVVNPQRNEVRCPYDATREARALEASGVRVGNGTIEAEGFSYGVFDLGR GT:EXON 1|1-529:0| BL:SWS:NREP 1 BL:SWS:REP 10->411|MAL2_DROVI|5e-45|36.0|381/524| SEG 439->451|llhlvrrlvalra| SEG 472->483|vyvrggrylvvv| BL:PDB:NREP 1 BL:PDB:REP 5->459|1zjaA|8e-44|35.9|415/557| RP:PDB:NREP 1 RP:PDB:REP 17->407|3bshA|2e-37|19.1|356/404| RP:PFM:NREP 1 RP:PFM:REP 40->370|PF00128|2e-26|42.0|281/296|Alpha-amylase| HM:PFM:NREP 2 HM:PFM:REP 33->249|PF00128|8.2e-38|33.0|197/316|Alpha-amylase| HM:PFM:REP 330->372|PF00128|3e-08|41.9|43/316|Alpha-amylase| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF00128|IPR006047| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF00128|IPR006047| GO:PFM GO:0043169|"GO:cation binding"|PF00128|IPR006047| RP:SCP:NREP 1 RP:SCP:REP 7->456|1m53A2|3e-50|28.9|433/478|c.1.8.1| HM:SCP:REP 6->456|1m53A2|2.2e-86|38.4|411/478|c.1.8.1|1/1|(Trans)glycosidases| OP:NHOMO 1886 OP:NHOMOORG 744 OP:PATTERN --1-1--1--------1-------3--4213-------------------11---1-221-111---- 25-27132111-2-13322-23--332222222444113314224242322147A313--1132513764244332322--13-----1121-4-----1-2-134-54----------------1212211121247666---82378211111--222222---32331-1-----1----9751212-273444444443444444244415444554-267455454-332222222222222211132452-47-1525882246242442655222422222223333433232322223333222222211-222231-142222222626-422-4335-13--17-111----6--122131-2--13331-----1233111122222------------21511423322-2225542354332142322-333311-111111111---1-32------------------------------32-2--1-11111-111111111131-111-111111---1114-1-----15---122-21----------322-1-1--111-------211-221-1551513-1---------------------------5543-22-2352322223-222-21-2--2---2---------26--1212222222222-22222223222222222223432111-211212222222222231112222--222222222222-------------1-614---131-------------------4611311212211114111---------1133422222344552122222-11------11221111--------1-4----1---1-3-----2---31---435223133313- ----112-------1544425556252-------------------1123586524122222-12-2441--3-5575A6-2222512-2-1421121211-1-----2-511111---1--1111111591-11411-11-11-11---1111-111124627545B9GE1112---3M-------1-3----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 459 STR:RPRED 86.8 SQ:SECSTR HHHHHHHHHHccTTGGcccEEEcccGGGGcTTcHHHHHGGGHHHHHHTTccEEEEcccccccccccccccccTTccTTccccHHHHHHHHHHHHHTTcEEEEEEccccccccEEcTTccEccccccTTcccGGGccTTcTTTcccccccccccccTTcccccTEEEEccTTccTcHHHccTTcHHHHHHHHHHHHHHHHHcccEEEETTGGGccHHHHHHHHTTccccEEEcccccccccTTcccccccHHHHHHHHHHHHTTTGGGccEEEEcHHHHHHHHHHTTTcGGGGccTTcccccGGGTcGGGEEEHHTcccccTTcEEEEEcccTTcTTTccccccGGGHHHHHHHHTTcccEEEEEHHHHHcccEEEEETTTEEEEEcccHcccTTccccccEEEEEETcccGGGGGcTTTTTcGGGGGHHHHTTccTTcHHHHHHHHHHHHHHcGGGccc###################################################################### DISOP:02AL 1-2| PSIPRED cccccccHHHHHcccEEEEEccccccccccccccHHHHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEcccccccccHHHHHHHccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEcHHHHHHHccccccccHHHHHHHHHHHHHHcccEEEEEEcccccHHHcccccccHHHHHHcccccHHHHHHHHHcccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccHHHHHHHHHHHHHccccEEEEccEEEccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHccHHccccEEEEEccccEEEEEEccEEEEEEEccccEEEEEcccccccEEEEEccEEccccEEEccccEEEEEEEcc //