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Streptomyces avermitilis MA-4680 (save0)
Gene : fadB1
DDBJ      :fadB1        putative fatty acid oxidation complex alpha-subunit
Swiss-Prot:             

Homologs  Archaea  34/68 : Bacteria  558/915 : Eukaryota  165/199 : Viruses  0/175   --->[See Alignment]
a.100.1c.14.1c.2.1
:735 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->731 1wdlA PDBj 2e-67 29.4 %
:RPS:PDB   7->300 1dciA PDBj 7e-30 21.5 %
:RPS:PDB   323->726 3c7aA PDBj 2e-27 9.6 %
:RPS:SCOP  1->316 1wdkA4  c.14.1.3 * 2e-43 25.7 %
:RPS:SCOP  346->490 1dliA2  c.2.1.6 * 5e-18 12.1 %
:RPS:SCOP  504->622 1wdkA1  a.100.1.3 * 2e-16 17.5 %
:RPS:SCOP  626->731 1wdkA2  a.100.1.3 * 5e-17 39.8 %
:HMM:SCOP  1->316 1wdkA4 c.14.1.3 * 3.6e-63 34.8 %
:HMM:SCOP  318->503 1f0yA2 c.2.1.6 * 3.4e-61 51.6 %
:HMM:SCOP  503->645 1wdkA1 a.100.1.3 * 3.8e-19 28.8 %
:HMM:SCOP  626->733 1wdkA2 a.100.1.3 * 1.2e-16 37.9 %
:RPS:PFM   54->194 PF00378 * ECH 5e-27 53.7 %
:RPS:PFM   323->502 PF02737 * 3HCDH_N 5e-42 53.3 %
:HMM:PFM   323->501 PF02737 * 3HCDH_N 1.4e-67 48.6 179/180  
:HMM:PFM   20->193 PF00378 * ECH 3.8e-37 40.7 167/170  
:HMM:PFM   504->604 PF00725 * 3HCDH 1.9e-19 33.0 91/97  
:BLT:SWISS 54->731 FADB_SERP5 3e-78 32.6 %
:PROS 430->439|PS00923|ASP_GLU_RACEMASE_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69391.1 GT:GENE fadB1 GT:PRODUCT putative fatty acid oxidation complex alpha-subunit GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(2056428..2058635) GB:FROM 2056428 GB:TO 2058635 GB:DIRECTION - GB:GENE fadB1 GB:PRODUCT putative fatty acid oxidation complex alpha-subunit GB:NOTE similar to glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a: including enoyl-CoA hydratase; 3-2-trans-enoyl-CoA isomerase; 3-hydroxybutyryl-CoA epimerase; 3-hydroxyacyl-CoA dehydrogenase GB:PROTEIN_ID BAC69391.1 LENGTH 735 SQ:AASEQ MSTEPTTIRWEQDETGIVTLVLDDPNQSANTMNQAFRASIAAIADRAEAEKDSIRGIIYTSAKKTFFAGGDLKDMMKAGPSDAQRAFETGTAIKNSLRRIETLGKPVVAAINGAALGGGYEIALASHHRIALDAPGSKIGLPEVTLGLLPAGGGVTRTVRLMGIADALLKVLLQGTQYAPARALENGLVHEVAATHEEMLAGARAFIDANPESQQPWDKPGYRIPGGTPANPKFAANLPAFPANLKKQLNGAPYPAPRNILAAAVEGSQVDFETALVIEARYFTELVTGQTAKNMIQAFFFDLQAVNSGANRPQGVAPRQVRKVAVLGAGMMGAGIAYSCARAGIEVVLKDVSAEAAAKGRGYSEKLCAKAVSRGRTTQEKADALLARITPTADPADLAGCDAVIEAVFEDTALKHKVFEEIEHIVEPDALLCSNTSTLPITALAEGVERQADFIGLHFFSPVDKMPLVEIIKGERTGDEALARAFDLVRQINKTPIVVNDSRGFFTSRVIGHFINEGVAMVGEGIEPASIEQAAAQAGYPAKVLSLMDELTLTLPRKIRAESKRAVEEAGGTWVTHPAEAVIDRMVDEFGRTGRGGGAGFYDYVDGKRAKLWPGLREHFTKPGHEIPFEDMQERMLFAEALDTVRLLEEGVLTSVADANIGSIFGIGFPGWTGGVLQYINGYAGGPGAGAGAGAGLPGFVARARELAERYGERFTPPALLVEKAEKGEHFSDAK GT:EXON 1|1-735:0| BL:SWS:NREP 1 BL:SWS:REP 54->731|FADB_SERP5|3e-78|32.6|648/729| PROS 430->439|PS00923|ASP_GLU_RACEMASE_1|PDOC00714| SEG 35->50|afrasiaaiadraeae| SEG 328->335|gagmmgag| SEG 591->600|grtgrgggag| SEG 682->699|gyaggpgagagagaglpg| BL:PDB:NREP 1 BL:PDB:REP 14->731|1wdlA|2e-67|29.4|691/715| RP:PDB:NREP 2 RP:PDB:REP 7->300|1dciA|7e-30|21.5|251/275| RP:PDB:REP 323->726|3c7aA|2e-27|9.6|385/403| RP:PFM:NREP 2 RP:PFM:REP 54->194|PF00378|5e-27|53.7|136/170|ECH| RP:PFM:REP 323->502|PF02737|5e-42|53.3|180/180|3HCDH_N| HM:PFM:NREP 3 HM:PFM:REP 323->501|PF02737|1.4e-67|48.6|179/180|3HCDH_N| HM:PFM:REP 20->193|PF00378|3.8e-37|40.7|167/170|ECH| HM:PFM:REP 504->604|PF00725|1.9e-19|33.0|91/97|3HCDH| GO:PFM:NREP 4 GO:PFM GO:0003824|"GO:catalytic activity"|PF00378|IPR001753| GO:PFM GO:0008152|"GO:metabolic process"|PF00378|IPR001753| GO:PFM GO:0006631|"GO:fatty acid metabolic process"|PF02737|IPR006176| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02737|IPR006176| RP:SCP:NREP 4 RP:SCP:REP 1->316|1wdkA4|2e-43|25.7|307/310|c.14.1.3| RP:SCP:REP 346->490|1dliA2|5e-18|12.1|140/196|c.2.1.6| RP:SCP:REP 504->622|1wdkA1|2e-16|17.5|114/117|a.100.1.3| RP:SCP:REP 626->731|1wdkA2|5e-17|39.8|93/95|a.100.1.3| HM:SCP:REP 1->316|1wdkA4|3.6e-63|34.8|310/0|c.14.1.3|1/1|ClpP/crotonase| HM:SCP:REP 318->503|1f0yA2|3.4e-61|51.6|186/0|c.2.1.6|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 503->645|1wdkA1|3.8e-19|28.8|125/125|a.100.1.3|1/2|6-phosphogluconate dehydrogenase C-terminal domain-like| HM:SCP:REP 626->733|1wdkA2|1.2e-16|37.9|95/95|a.100.1.3|2/2|6-phosphogluconate dehydrogenase C-terminal domain-like| OP:NHOMO 3229 OP:NHOMOORG 757 OP:PATTERN 11-1--5887988867-121121C63332134-----------------------------3441-22 3544D2-6--132397555-53335E55555565557AHJ265722241212545646--67B-856BAA3-----11-11-6---------1-221--4-333363344------------------------1-33332---411--1-------------------1-------------43323---5334444444655454443633325535753341------731111111111111112---1-------1----------1-------1111---------------------------------------2-1255222222232413443332-3-416-22-66272B-19---2--2-5-19665-----437784235434567876784885-22622836988-5332345544776945355A5565448--------411-1453------------------1--1--1----155B5-6EB7C999898456668889666657CBL8FEE33773776779688BE226----34-------11-F764G76-----------7862C121134336723---------------------------33-351324433444433433334343323---22--------3222-243224344354-243433343323233333433322322222222222222222272322223--222222222222---2111114444-3713111--------1---99979465526-88875864465695111111111111-222422222342333344444335------12112222--------1---------------------------------------- ----326-952-434644444564324343323343374444441433245565234222223--------------------------35244433222334535-796C8A6656445546655384Fa6-9793332644831343154273664758B3C5437384BC823211H1113355774344464445 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 725 STR:RPRED 98.6 SQ:SECSTR cccccccEEEEEEETTEEEEEEccGGGGTTcccHHHHHHHHHHHHHHHTccTTccEEEEEEcTTcccccccHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHccccEEEEEccEEETHHHHHHTTccEEEEcTETTcEEEccGGGGTccccccHHHHGGGTcccHHHHHHHHHHccEEEHHHHHHHTcccEEEccHHHHHHHHHHHHHHHHccHHHHHHHHHHHTTTcHHHHHHTTccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHTccHHHHHHHHHHHEEEcccccHHHHHHHHHcGGGcEEEEEcccHHHHHHHHHHTTcTTEEEEEEccTTHHHHHHHHHTTccEEEEEEcccccEEEEEEcccEEEccHHHHHTTccEEEEcccGGGccHHHHHHHHTTTccTTcEEEETTccTTHHHHHHHHHGGGGcEEEEEccccEEEEEEETTTEEEEEEEccEEEEEEEccccccccHHHHHHHHHccccEEEEcccHHHHHHTTcccHHTTHHHHHHHHHHTTccccccccccccGGGccHHHHHHHHHHHHHHHHHHHHHHHHcTTcccTTcccHHHHHHHHcTTTccccccHHHHHHTcGGTTccccEEEETTEEEEcccccTTTTTTTTTHHHHHHHHHHHTcccHHHHHHHHHHHHHHTccc######TTcHHHHccTTccccTTGGGcccGGGGTcccHHTTccc#### DISOP:02AL 1-2, 371-383, 729-731, 733-735| PSIPRED cccccEEEEEEEEcccEEEEEEEccccccccccHHHHHHHHHHHHHHHcccccEEEEEEEccccEEEEcccHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHccHHEEEcccccEEEccHHHHcccccccHHHHHHHHHcHHHHHHHHHHHcccccHHHHHHHccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccHHHHHcccEEEEEEEccHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHccccccEEEEccccccccccEEEEEccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHccccccccccccEEccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccccHHHHHHHHccHHHHHHHHHccHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccc //