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Streptomyces avermitilis MA-4680 (save0)
Gene : glcD1
DDBJ      :glcD1        putative (S)-2-hydroxy-acid oxidase
Swiss-Prot:             

Homologs  Archaea  43/68 : Bacteria  577/915 : Eukaryota  185/199 : Viruses  0/175   --->[See Alignment]
d.145.1d.153.2d.58.32
:456 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   89->215 2uuuC PDBj 4e-13 32.2 %
:RPS:PDB   17->454 1e0yA PDBj 2e-44 13.5 %
:RPS:SCOP  86->256 1kuuA  d.153.2.1 * 4e-25 12.0 %
:RPS:SCOP  233->454 1f0xA1  d.58.32.2 * 3e-24 14.6 %
:HMM:SCOP  5->219 1f0xA2 d.145.1.1 * 2.2e-66 48.3 %
:HMM:SCOP  222->456 1e8gA1 d.58.32.1 * 1.3e-55 37.0 %
:RPS:PFM   51->182 PF01565 * FAD_binding_4 2e-14 40.5 %
:RPS:PFM   242->454 PF02913 * FAD-oxidase_C 3e-27 38.5 %
:HMM:PFM   220->454 PF02913 * FAD-oxidase_C 4.1e-61 36.6 235/249  
:HMM:PFM   43->182 PF01565 * FAD_binding_4 2.3e-45 46.4 138/138  
:BLT:SWISS 51->456 GLCD_BACSU 6e-65 36.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69096.1 GT:GENE glcD1 GT:PRODUCT putative (S)-2-hydroxy-acid oxidase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1706772..1708142) GB:FROM 1706772 GB:TO 1708142 GB:DIRECTION - GB:GENE glcD1 GB:PRODUCT putative (S)-2-hydroxy-acid oxidase GB:NOTE similar to glycolate oxidase: PF01565: FAD binding domain GB:PROTEIN_ID BAC69096.1 LENGTH 456 SQ:AASEQ MTEVVADVATALAAALPGRVVTDRDAMEAYRRDQCLLAPAGRPAAVVRARSTDDVITTLRTAGDHHAPVVTRGAGTGLAGAANAIDGCVVLSLAAMDRILALDVPGRTATVEPGVLTGDLDARARQHGLWYPPDPGSKAISTIGGNLATNAGGMCCAKYGVTADHVASLTAVLADGRVIRTGPPTRKNVAGLDLTRLLVGSEGTLAVIVDATVRLRPFPVATATVVATFPTPRQAVDTVLRIAAVADPAVVELMDRTCMGAVNRLTRMGLDESAGALLLVQCDGPSAGQEAATCARLAEAGGATEALHTADPAEGEMFMQARRMVYPALERLGTTLLDDVGVAVQDLPRLLAAIERTAAEHDVLVGTFGHAADGNLHPTVVYDAADRDAADRAGAAFDDIVAAALALGGTITGEHGVGSLKTRYLDAQLGPTELELMTGIKAVFDPADLLNPGRAY GT:EXON 1|1-456:0| BL:SWS:NREP 1 BL:SWS:REP 51->456|GLCD_BACSU|6e-65|36.6|404/470| SEG 4->16|vvadvatalaaal| SEG 38->50|apagrpaavvrar| SEG 73->84|gagtglagaana| SEG 217->232|pfpvatatvvatfptp| SEG 383->409|daadrdaadragaafddivaaalalgg| BL:PDB:NREP 1 BL:PDB:REP 89->215|2uuuC|4e-13|32.2|121/541| RP:PDB:NREP 1 RP:PDB:REP 17->454|1e0yA|2e-44|13.5|438/550| RP:PFM:NREP 2 RP:PFM:REP 51->182|PF01565|2e-14|40.5|131/139|FAD_binding_4| RP:PFM:REP 242->454|PF02913|3e-27|38.5|213/242|FAD-oxidase_C| HM:PFM:NREP 2 HM:PFM:REP 220->454|PF02913|4.1e-61|36.6|235/249|FAD-oxidase_C| HM:PFM:REP 43->182|PF01565|2.3e-45|46.4|138/138|FAD_binding_4| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01565|IPR006094| GO:PFM GO:0050660|"GO:FAD binding"|PF01565|IPR006094| GO:PFM GO:0003824|"GO:catalytic activity"|PF02913|IPR004113| GO:PFM GO:0050660|"GO:FAD binding"|PF02913|IPR004113| RP:SCP:NREP 2 RP:SCP:REP 86->256|1kuuA|4e-25|12.0|158/202|d.153.2.1| RP:SCP:REP 233->454|1f0xA1|3e-24|14.6|205/237|d.58.32.2| HM:SCP:REP 5->219|1f0xA2|2.2e-66|48.3|211/0|d.145.1.1|1/1|FAD-binding domain| HM:SCP:REP 222->456|1e8gA1|1.3e-55|37.0|230/0|d.58.32.1|1/1|FAD-linked oxidases, C-terminal domain| OP:NHOMO 2108 OP:NHOMOORG 805 OP:PATTERN 22-1-133122222221133321331111122----------------13111----1--12113-11 1135521222213-24433-322245434442322228B5144231-21111143211--42524674421--------1-1311111-------------2111---1---------------------1----166644----32222221222222122222232222-1-----1----22233--131122222222223222353111122234413--------2------------------------1111----11--21------------------------------------------------------3-121111111212-122111121-1-1--2-351121--42--1--1-322311411111338552254564433333333335-45644B47444-5334338544766432145443562342222222242222225-----------------------------112611544457557473444477884444339677877-233355444737348333211-12111111122234413613324243444-322112222223345131--1111111111111111111111221-1-21111-11111111111111111111---4223------1---1--21-2222222-122222222212222222--1----1-----------------1--1---------------------1--111----21244111111-1111111111111112322133333433233342333----------1111111111111122222222232222111-221111----------1--------------------------11---1---421 ----332-741-242245435345554333333333343313323333444667333434442332433422324221223444631--45442322222322332-323733253321-1232742528K5-4351211321311313-31-23241558433321425335332222H2221131-63312286642 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 438 STR:RPRED 96.1 SQ:SECSTR ################GGGEEEcccccccccccccccccccccTTccccccHHHHHHHHHHHHHHTccEEEEcccccTTTTTTccTTcEEEEcTTcccEEEEETTTTEEEEcTTccHHHHHHHHHTTTGGGTEEccccccccccHHHHHHTTcccccTTcccGGGccccEEEETTccEEEcTTccGGGccccTTTTTGGGcccccEEEEEEEEEcEEccccEEEEEEEEccTTHHHHHHHHHHHHHccccccEEEEHHHHHHHHcccTTTccccccccHHHHHEEEEccHHHHHHHHHHHHHHHTTcTcGGGccTTcHHHHHHHHTTTccccGGGGGGEEcccHHHHHHHHHHHHHHHHHTTccccEEEEEccccEEEEEEEETTcHHHHHHHHHHHHHHHHHHHHTTcccccccTTTHHHHHHHccHHHHHHHHHHHHHHHHHcTTccccTTG## DISOP:02AL 456-457| PSIPRED ccHHHHHHHHHHHHHccccEEccHHHHHHHHcccccccccccccEEEEcccHHHHHHHHHHHHHcccEEEEEccccccccccccccccEEEEccccccEEEEEccccEEEEEccccHHHHHHHHHHcccEEEEccccccccccHHHcccccccccccccccccccEEEEEEEcccccEEEEccccccccccHHHHHHHHccccccEEEEEEEEEEEEccccEEEEEEEEccHHHHHHHHHHHHHHccccEEEEEcHHHHHHHHHHHcccccccccEEEEEEEccccHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcHHHHHHHHHHHHHHHHHcccEEEEEEEEccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHccEEEEEccccHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccc //