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Streptomyces avermitilis MA-4680 (save0)
Gene : hopC
DDBJ      :hopC         squalene/phytoene dehydrogenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  19/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:475 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   46->461 2bxrA PDBj 1e-06 8.7 %
:RPS:SCOP  133->356 1sezA1  c.3.1.2 * 5e-13 12.3 %
:HMM:SCOP  22->465 1o5wA1 c.3.1.2 * 2.9e-36 29.2 %
:HMM:PFM   29->456 PF01593 * Amino_oxidase 5e-49 25.8 426/449  
:BLT:SWISS 280->429 Y4AB_RHISN 4e-06 32.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69363.1 GT:GENE hopC GT:PRODUCT squalene/phytoene dehydrogenase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(2023433..2024860) GB:FROM 2023433 GB:TO 2024860 GB:DIRECTION - GB:GENE hopC GB:PRODUCT squalene/phytoene dehydrogenase GB:NOTE squalene/hopene gene cluster, sqd, PF01593: Flavin containing amine oxidoreductase GB:PROTEIN_ID BAC69363.1 LENGTH 475 SQ:AASEQ MSDATRLEGPDAEASGRPERAAVVVGGGLAGITAALALADAGVRVTLLEGRPRLGGLAFSFQRGALTVDNGQHVYLRCCTAYRWFLDRIDAASLAPLQDRLDVPVLDAGGKPGRRLGRIGRTALPVPLHLAKSLATYPHLSLAERARVGRAALALKGLDLADPALDTQNFGSWLAAHGQSARAVEALWDLVGVATLNAVAGDSSLGLAAMVFKTGLLSDPGAADIGWARVPLGELHDRLARKALDSVGVRTEVRTRVTSISLNGNGRWSVQVPGETLHADAVVLAVPQREAHELLPEGALDAPERLLEIGTAPILNVHVVYDRKVLSRPFFAALGSPVQWVFDRTEASGLPEGQYLALSQSAAQDEIDEPVSVLRERYLPELERLLPATRGAQVKDFFVTRERTATFAPTPGVGRLRPGARTKAPGLCLAGAWTATGWPATMESAVRSGVSAAGAALNALGRPRDHLLELFEEAA GT:EXON 1|1-475:0| BL:SWS:NREP 1 BL:SWS:REP 280->429|Y4AB_RHISN|4e-06|32.8|131/417| SEG 21->45|aavvvggglagitaalaladagvrv| SEG 151->166|aalalkgldladpald| SEG 249->258|vrtevrtrvt| SEG 374->387|lrerylpelerllp| SEG 430->441|agawtatgwpat| SEG 444->456|savrsgvsaagaa| RP:PDB:NREP 1 RP:PDB:REP 46->461|2bxrA|1e-06|8.7|401/445| HM:PFM:NREP 1 HM:PFM:REP 29->456|PF01593|5e-49|25.8|426/449|Amino_oxidase| RP:SCP:NREP 1 RP:SCP:REP 133->356|1sezA1|5e-13|12.3|211/353|c.3.1.2| HM:SCP:REP 22->465|1o5wA1|2.9e-36|29.2|284/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 19 OP:NHOMOORG 19 OP:PATTERN -------------------------------------------------------------------- 111-1----------------------------111----1111---------------------11111-------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 416 STR:RPRED 87.6 SQ:SECSTR #############################################EEEcccccccTTccEEEETTTEEEEcccccccccTTcHHHHHHHHHTTccEEEcccccEEEEEccccEEEcccccHHHHHHHHHHHHHHHHHHHTccTTcGGGcTTHHHHHHccccccGGGGccHHHHHHHHcccHGHHHHHHHHHHHHHHcccGGGccHHHHHHHHHTTTHHHHHccccccEEETTcHHTHHHHHHHHHHHGGGEETTccEEEEEcccccEEEEETTccEEEEEEEEEcccHHHHTTcEEEccccHHHHGGGcccccEEEEEEEccccHHHHTTEEEEEEEccEEEEcccTTccccEEEEEEETHHHHHHHTccHHHHHHHHHHHHHHHHTcGGGGcccEEEEEEcTTcTTTcTTHHHHTGGGTTcccTTEEEccGGGccccTTcHHHHHHHHHHHHHHHHHTcc############## DISOP:02AL 1-4, 6-19, 469-475| PSIPRED ccccccccccccccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEEcccccccEEEEEEcccEEEccccEEEEccccHHHHHHHHHccccccccccccccEEEEccccccEEccccccccccccHHHHHHHHccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHHHHcccEEEEcccEEEEEEccccEEEEEEccEEEEccEEEEEccHHHHHHHcccccHHHHHHHHHcccccEEEEEEEEccccccccccEEEcccccEEEEccccccccccEEEEEEEcccHHHHcccHHHHHHHHHHHHHHHccccccccccEEEEEEEcccccccccccHHcccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccc //