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Streptomyces avermitilis MA-4680 (save0)
Gene : hopE
DDBJ      :hopE         squalene/phytoene synthase
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  198/915 : Eukaryota  18/199 : Viruses  0/175   --->[See Alignment]
a.128.1
:300 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   101->213 2zy1A PDBj 3e-08 25.7 %
:RPS:PDB   76->239 2e92B PDBj 1e-12 11.6 %
:RPS:SCOP  19->250 1ezfA  a.128.1.2 * 1e-27 12.2 %
:HMM:SCOP  8->298 1ezfA_ a.128.1.2 * 3.8e-62 30.9 %
:RPS:PFM   97->252 PF00494 * SQS_PSY 1e-19 40.4 %
:HMM:PFM   19->279 PF00494 * SQS_PSY 4.4e-66 37.0 246/267  
:BLT:SWISS 72->252 CRTY_SPIPL 6e-20 32.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69365.1 GT:GENE hopE GT:PRODUCT squalene/phytoene synthase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(2025944..2026846) GB:FROM 2025944 GB:TO 2026846 GB:DIRECTION - GB:GENE hopE GB:PRODUCT squalene/phytoene synthase GB:NOTE squalene/hopene gene cluster, sqs2, PF00494: Squalene/phytoene synthase GB:PROTEIN_ID BAC69365.1 LENGTH 300 SQ:AASEQ MTEAGTARAADPERDTLDKAADENFPVAPFFLPRAWRTDLMAVYGFARLVDDIGDGDLAPGGADARLLGVSPREAEDRLALLDAFEADLHRVFDSTPRHPLLRRLQPTVRRTGLSPEPFLGLIAANRQDQLVTRYETYDDLVAYCELSANPVGHLVLGVTGTSTPERVRRSDAICTALQIVEHLQDVSEDLGRDRVYLPAEDMKRFHVQEADLATATAGASVRALVAYETERALNLLNEGTPLVGSVHGRLRLLLAGFVAGGRAAIRAIAAAEYDVLPGPPKPGKLQLLREVGVTLRGEG GT:EXON 1|1-300:0| BL:SWS:NREP 1 BL:SWS:REP 72->252|CRTY_SPIPL|6e-20|32.6|181/309| SEG 51->69|ddigdgdlapggadarllg| SEG 260->272|aggraairaiaaa| SEG 277->289|lpgppkpgklqll| BL:PDB:NREP 1 BL:PDB:REP 101->213|2zy1A|3e-08|25.7|113/279| RP:PDB:NREP 1 RP:PDB:REP 76->239|2e92B|1e-12|11.6|164/290| RP:PFM:NREP 1 RP:PFM:REP 97->252|PF00494|1e-19|40.4|156/257|SQS_PSY| HM:PFM:NREP 1 HM:PFM:REP 19->279|PF00494|4.4e-66|37.0|246/267|SQS_PSY| GO:PFM:NREP 2 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00494|IPR002060| GO:PFM GO:0016740|"GO:transferase activity"|PF00494|IPR002060| RP:SCP:NREP 1 RP:SCP:REP 19->250|1ezfA|1e-27|12.2|230/323|a.128.1.2| HM:SCP:REP 8->298|1ezfA_|3.8e-62|30.9|275/0|a.128.1.2|1/1|Terpenoid synthases| OP:NHOMO 335 OP:NHOMOORG 221 OP:PATTERN ------------------------1--111-1------------------------------------ 22212----------1111-1---1-111111-111---123331---------------11--1243351---------1-1------------------------------------------1111111111111111---11111111111111111111111111111111111111111-11---21--------------------1--------------------------------------------------11-----------------------------------------------------------------------------------------------------------1-2---------1122212132123------------22122121----------2--------------------1111111111112212----------------------------------122222------1----111-------1111111--111222222222222222222222232222--1222--------------------------1-1---------------------------------------------------------------1--2-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-----------------------------------------------------2-- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------1111I211113347-11------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 221 STR:RPRED 73.7 SQ:SECSTR #######################HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHTccEETTEEcHH###HHHHHcHHHHHHHHHHHHHHHHGGGccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHTcccHHHHHHHHHHHHTTcHHHHHHHHHHHHHTcccHHHHHHHHHHHHHTccHH##################################################### DISOP:02AL 1-8| PSIPRED ccccHHHHHHHHHHHHHHHHHccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEccHHHHHHccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccc //