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Streptomyces avermitilis MA-4680 (save0)
Gene : idsA1
DDBJ      :idsA1        putative polyprenyl diphosphate synthase
Swiss-Prot:             

Homologs  Archaea  59/68 : Bacteria  795/915 : Eukaryota  132/199 : Viruses  0/175   --->[See Alignment]
a.128.1
:344 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   96->264 1wy0A PDBj 7e-25 39.0 %
:RPS:PDB   96->326 3cp6A PDBj 1e-34 20.0 %
:RPS:SCOP  96->270 1v4eA  a.128.1.1 * 1e-39 26.7 %
:HMM:SCOP  1->344 1ubyA_ a.128.1.1 * 9e-78 38.9 %
:RPS:PFM   96->268 PF00348 * polyprenyl_synt 6e-21 38.8 %
:HMM:PFM   61->284 PF00348 * polyprenyl_synt 2.1e-57 38.1 223/260  
:HMM:PFM   279->334 PF06230 * DUF1009 0.00071 21.8 55/214  
:BLT:SWISS 17->328 GGPPS_MYCTU 7e-29 36.3 %
:PROS 227->239|PS00444|POLYPRENYL_SYNTHET_2
:PROS 100->114|PS00723|POLYPRENYL_SYNTHET_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68839.1 GT:GENE idsA1 GT:PRODUCT putative polyprenyl diphosphate synthase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1417491..1418525) GB:FROM 1417491 GB:TO 1418525 GB:DIRECTION - GB:GENE idsA1 GB:PRODUCT putative polyprenyl diphosphate synthase GB:NOTE probably farnesyl pyrophosphate synthase GB:PROTEIN_ID BAC68839.1 LENGTH 344 SQ:AASEQ MTTLTTALKAGPEAPAILHRCRELVAPALAEAVGGMHPWMREMADYALGRGAAGGAPAAHSQGKGVRQALAVLGAEAAGGPAEAGVPAAVAVELVHTFSLLHDDIMDGDAMRRGRPALWKAYGTGPAVLAGDALFALAVQTLTTASAPGAAHRLSAALGDLVRGQADDLLFAHRPWTGPEAVSVAEYEAMAEHKTGSLLGCALALGAHLAGAPEETAAVLDRTGRHLGVAFQIVDDLLGIWGDPAVTGKPVHGDLRQGKKTFPVLAALATPSGSALEGLLTARDDTAVVRAAAVVEQAGGRSAALREARRHLTVAHGLLASVQPAPRPAADLRTLLSALSRRTI GT:EXON 1|1-344:0| BL:SWS:NREP 1 BL:SWS:REP 17->328|GGPPS_MYCTU|7e-29|36.3|306/359| PROS 227->239|PS00444|POLYPRENYL_SYNTHET_2|PDOC00407| PROS 100->114|PS00723|POLYPRENYL_SYNTHET_1|PDOC00407| SEG 44->63|adyalgrgaaggapaahsqg| SEG 69->95|alavlgaeaaggpaeagvpaavavelv| SEG 196->212|gsllgcalalgahlaga| SEG 281->295|tarddtavvraaavv| SEG 329->343|aadlrtllsalsrrt| BL:PDB:NREP 1 BL:PDB:REP 96->264|1wy0A|7e-25|39.0|164/327| RP:PDB:NREP 1 RP:PDB:REP 96->326|3cp6A|1e-34|20.0|230/334| RP:PFM:NREP 1 RP:PFM:REP 96->268|PF00348|6e-21|38.8|170/246|polyprenyl_synt| HM:PFM:NREP 2 HM:PFM:REP 61->284|PF00348|2.1e-57|38.1|223/260|polyprenyl_synt| HM:PFM:REP 279->334|PF06230|0.00071|21.8|55/214|DUF1009| GO:PFM:NREP 1 GO:PFM GO:0008299|"GO:isoprenoid biosynthetic process"|PF00348|IPR000092| RP:SCP:NREP 1 RP:SCP:REP 96->270|1v4eA|1e-39|26.7|165/280|a.128.1.1| HM:SCP:REP 1->344|1ubyA_|9e-78|38.9|329/0|a.128.1.1|1/1|Terpenoid synthases| OP:NHOMO 1676 OP:NHOMOORG 986 OP:PATTERN 11-1-1111111111112-----12222111111111111111111112211111112111-111-11 222-511222222123344-42117244444334441111222211311231111111--33-15365362-111111111121-21211212222---11111111111--------------122222222212222221112222232212222222222222211122222212222221222211-222222222222222222212222222222222233333312222222222222222222222--111112-2222222121--21--22221111111111111111111111111111--1111111112---12-11111111121111111-11--11-2233222222231121-1-121211-11221112332212322211111111111-111111111111111111-11111212211211111211111111111111112211111111211111111111111111111-111122111322222211111112111111122212221121121-1111111121112211211111112221221221112-2-111-2222222222----221112111222222211111111111-122222122111222222222222222222222--22232------22212222222222222-22222222222222222222222222222222222222222222222222221222222222222122111111212111221222222222222112------12213221122111222222112-1111111111112222223122211111111112222222-2211-----------1--------------------------------1-1-1-2 -1--11--41-----12112113122111111112--1--111211--11111---211222------------------------1-----2-1-1111-1-111-14-2212233111122122132A74-331211-1-122-22122--312222----112-122-112-1323j33323649C2B31211111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 233 STR:RPRED 67.7 SQ:SECSTR ###############################################################################################HHHHHHHHHHHTTccEETTEEcGGGcTTTGGGHHHHHHHHHHHHHHHHHHHHTTcTTHHHHHHHHHHHHHHHHHHTccTTccccTTccHHHHHHHHHHHHHccHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccTcccTTTTTcccHHHHHHHHHccHHHHHHHTTcccHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHcTTccc################ DISOP:02AL 344-345| PSIPRED ccccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcccHHHHHHHccccHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcc //