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Streptomyces avermitilis MA-4680 (save0)
Gene : int1
DDBJ      :int1         putative tyrosine-family recombinase/integrase
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  549/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.60.9d.163.1
:380 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   45->350 2a3vC PDBj 8e-09 28.4 %
:RPS:PDB   45->359 2a3vB PDBj 3e-18 15.6 %
:RPS:SCOP  31->115 1crxA1  a.60.9.1 * 2e-05 15.5 %
:RPS:SCOP  151->359 1crxA2  d.163.1.1 * 7e-15 13.8 %
:HMM:SCOP  152->358 1a0pA2 d.163.1.1 * 3.4e-28 30.4 %
:RPS:PFM   236->349 PF00589 * Phage_integrase 3e-11 37.0 %
:HMM:PFM   183->349 PF00589 * Phage_integrase 4.7e-21 27.9 147/173  
:HMM:PFM   79->112 PF02899 * Phage_integr_N 0.00066 29.4 34/84  
:BLT:SWISS 185->349 XERD_STAEQ 1e-17 34.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC67868.1 GT:GENE int1 GT:PRODUCT putative tyrosine-family recombinase/integrase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(180284..181426) GB:FROM 180284 GB:TO 181426 GB:DIRECTION - GB:GENE int1 GB:PRODUCT putative tyrosine-family recombinase/integrase GB:NOTE PF00589: Phage integrase family GB:PROTEIN_ID BAC67868.1 LENGTH 380 SQ:AASEQ MARDVEAPIGSARLELVEGVRLLHPADAVLEAMLTGWGRQQRGGRHLQEKTVSDRIATIRRFVKFADAFPWTWGAADMDEWTTHLVAEKHLQPSTIRATQGAVRMFCDYLLDPRYDWAVECERRFGTHPIQVCHEWNTLDHLLDYEGDPDRRPMTRGELQQLFDHIDERVDLAIRRGRKGALTAYRDATLFKVIYGWGLRRTETARLDTFDWYRNPKAKEFGRFGMLEVRYGKSSRGQPPKRRSVCSTMPWAVEAVEDYTTNIRPRFKGHDRSKALWLSERGTRLSAKEIDERFSVYRKALKLDEDLVPHCLRHSYVTHSIEDGADPVFIQQQVGHEYASTTALYTGVSGDFANTMMRKAIDSALQRDLQDFGPGGRSRR GT:EXON 1|1-380:0| BL:SWS:NREP 1 BL:SWS:REP 185->349|XERD_STAEQ|1e-17|34.7|150/295| BL:PDB:NREP 1 BL:PDB:REP 45->350|2a3vC|8e-09|28.4|261/317| RP:PDB:NREP 1 RP:PDB:REP 45->359|2a3vB|3e-18|15.6|295/320| RP:PFM:NREP 1 RP:PFM:REP 236->349|PF00589|3e-11|37.0|108/168|Phage_integrase| HM:PFM:NREP 2 HM:PFM:REP 183->349|PF00589|4.7e-21|27.9|147/173|Phage_integrase| HM:PFM:REP 79->112|PF02899|0.00066|29.4|34/84|Phage_integr_N| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 2 RP:SCP:REP 31->115|1crxA1|2e-05|15.5|84/110|a.60.9.1| RP:SCP:REP 151->359|1crxA2|7e-15|13.8|196/212|d.163.1.1| HM:SCP:REP 152->358|1a0pA2|3.4e-28|30.4|181/182|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 781 OP:NHOMOORG 554 OP:PATTERN ---------------------------------1-----------------------1111------- --2-111111112111211-13111111111122233-8-112211122-123251-2---232-131---22221112122------11---1-----1-31111---121111111211111121211122-121111122221------------------------------------------221-11222222222222222221111223111222211111121111111111111111111112121111111111--22111112-----------------------------------------------1111-----------2--------11--1--23222222-222---1---225---1---------1--1----11111111111-----------11--111119111111-111--1------1--------1111----221-----1111-------------1111---1--1111122222212222221222222222122221111311111-111-222-1111--1111111--2----122-211111221--1-1-1-21--2-2122-------------------------1111-21--22-22222222222222213222--1-21-------12-11111111111111-1111111111111111111222116C21111111121111111111111111-111111111111---2---------2111-1111211111-111111111111121111111111111121211111111111112211111122222----------------11222211---------11--------------------------1--------222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 351 STR:RPRED 92.4 SQ:SECSTR #############################HHHHHHHHHHHHHTGTTccHHHHHHHHHHHHHHHTTTTTccGGccHHHHHHHHHHHHcTTcccHHHHHHHHHHHHHHHHTcccccccccccccccTTccccHHHHHHHHHTTTHHHHHHHHcccccHHHHHHHHHHccTTcHHHHHHHcHHHHHTccGGGEETTTTEEEEccccTTccEEEEccGGGHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHcTTGGGcGGGccccEEEEEEEETTTTEEEEEEccHHHHHHHHHHHHHHHTccccccHHHHHHHHHHHHHHTTccHHHHHHHcccccHHHHHHHHHHHHTcTTTcccGccHHHHHHHHHHHcHHHHHHH DISOP:02AL 1-5, 377-380| PSIPRED cccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccHHHHHHHHccccccHHHHHHHHHHHHHHHccHHHHHHHcccHHHccccccEEEEcccEEEEEccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHccccccccEEEEccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccc //