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Streptomyces avermitilis MA-4680 (save0)
Gene : int2
DDBJ      :int2         putative tyrosine-family recombinase/integrase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  123/915 : Eukaryota  1/199 : Viruses  1/175   --->[See Alignment]
d.163.1
:205 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   122->169 2a3vB PDBj 4e-07 53.2 %
:RPS:PDB   57->180 3crxA PDBj 1e-12 11.4 %
:RPS:SCOP  27->180 1crxA2  d.163.1.1 * 6e-13 10.3 %
:HMM:SCOP  44->179 1a0pA2 d.163.1.1 * 1.2e-24 33.1 %
:RPS:PFM   20->169 PF00589 * Phage_integrase 2e-15 45.2 %
:HMM:PFM   49->168 PF00589 * Phage_integrase 7.7e-25 32.7 104/173  
:HMM:PFM   31->63 PF01975 * SurE 0.00015 27.3 33/197  
:BLT:SWISS 52->169 XERCL_THETN 1e-18 39.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68079.1 GT:GENE int2 GT:PRODUCT putative tyrosine-family recombinase/integrase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(439342..439959) GB:FROM 439342 GB:TO 439959 GB:DIRECTION - GB:GENE int2 GB:PRODUCT putative tyrosine-family recombinase/integrase GB:NOTE PF00589: Phage integrase family GB:PROTEIN_ID BAC68079.1 LENGTH 205 SQ:AASEQ MHRPRRAHVQTCGPHRSAAGEVLGCVVDLHEGVLTVRQALQRVGGELLIVAPKTQRSARRVALPAECVTALRGQCARQIADRKAAGANWKGTVQGLVFTTKNGTPIVPRNLNRSFEVLCVRAGVRKVRFHDLRHTCASLLHEQGADARMIMEVLGHSSIRVTTDIYTFVRLDSQRSAFDRVGDALRGDGNDPDDDDGAAGVLVAV GT:EXON 1|1-205:0| BL:SWS:NREP 1 BL:SWS:REP 52->169|XERCL_THETN|1e-18|39.0|118/391| SEG 183->204|dalrgdgndpddddgaagvlva| BL:PDB:NREP 1 BL:PDB:REP 122->169|2a3vB|4e-07|53.2|47/320| RP:PDB:NREP 1 RP:PDB:REP 57->180|3crxA|1e-12|11.4|123/323| RP:PFM:NREP 1 RP:PFM:REP 20->169|PF00589|2e-15|45.2|126/168|Phage_integrase| HM:PFM:NREP 2 HM:PFM:REP 49->168|PF00589|7.7e-25|32.7|104/173|Phage_integrase| HM:PFM:REP 31->63|PF01975|0.00015|27.3|33/197|SurE| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 1 RP:SCP:REP 27->180|1crxA2|6e-13|10.3|145/212|d.163.1.1| HM:SCP:REP 44->179|1a0pA2|1.2e-24|33.1|127/182|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 192 OP:NHOMOORG 125 OP:PATTERN -------------------------------------------------------------------- --1-----------12-----1--1------11212-----377------------1---2-1---2413---------1--3-------11--------------1-----------------------------------12-2-------------------------------------2-------1--333333-12221111--11--11111211--1-----1--1-----1----1-------2-----------111-1-2--------11---------------1----111-----------------1412121---1--2-125111---1-2-----1-2-22-21-11-313----1------------1------1-1----------------------1----------------------------------------------------------------------------------------------------1-1--1-------------1--------------------------------11------------1---1---1-------------11111---------------11------------------------------------------------------------------------------------------------------------------------------------------------------------1--------1--------------------------------------------------------------------------------------------------------------------1-- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- --------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------- STR:NPRED 154 STR:RPRED 75.1 SQ:SECSTR ###########################EEcTTccEEEEEcccccTccEEEEEcccEcHHHHHHHHHHHHHHcGGGcTTcccccEEcTTccEEccccccccHHHHHHHHHHHHHHHHccccccccccccTTHHHHHHHHHHHHTcccHHHHHHHTTcccHHcHHHHHcTTccccccHHHHHH######################## DISOP:02AL 185-197| PSIPRED ccHHHHHHHHHccccHHHHHHHHHHHEEEcccEEEEEEEEEEEcccEEEccccccccEEEEEccHHHHHHHHHHHHHHHHHHHccccccccccccEEEEccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccccccccEEEEEc //