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Streptomyces avermitilis MA-4680 (save0)
Gene : int3
DDBJ      :int3         putative recombinase/integrase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  22/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.163.1
:74 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->66 1a0pA PDBj 8e-06 41.2 %
:RPS:PDB   13->74 1aihB PDBj 5e-09 22.6 %
:RPS:SCOP  15->74 1aihA  d.163.1.1 * 2e-09 23.3 %
:HMM:SCOP  14->70 4crxA2 d.163.1.1 * 2.2e-11 35.1 %
:RPS:PFM   17->56 PF00589 * Phage_integrase 8e-05 37.5 %
:HMM:PFM   14->58 PF00589 * Phage_integrase 3.4e-11 33.3 45/173  
:BLT:SWISS 13->69 Y4RA_RHISN 3e-15 57.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68207.1 GT:GENE int3 GT:PRODUCT putative recombinase/integrase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 642389..642613 GB:FROM 642389 GB:TO 642613 GB:DIRECTION + GB:GENE int3 GB:PRODUCT putative recombinase/integrase GB:NOTE probably pseudogene GB:PROTEIN_ID BAC68207.1 LENGTH 74 SQ:AASEQ MSSNGPACVPACPRVGPHRLRHALAGEMLRQGAGLAAIGQVLRHQDLATTTLYAKVDFTALRAVAQPWPRTEAA GT:EXON 1|1-74:0| BL:SWS:NREP 1 BL:SWS:REP 13->69|Y4RA_RHISN|3e-15|57.9|57/409| BL:PDB:NREP 1 BL:PDB:REP 14->66|1a0pA|8e-06|41.2|51/271| RP:PDB:NREP 1 RP:PDB:REP 13->74|1aihB|5e-09|22.6|62/168| RP:PFM:NREP 1 RP:PFM:REP 17->56|PF00589|8e-05|37.5|40/168|Phage_integrase| HM:PFM:NREP 1 HM:PFM:REP 14->58|PF00589|3.4e-11|33.3|45/173|Phage_integrase| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 1 RP:SCP:REP 15->74|1aihA|2e-09|23.3|60/170|d.163.1.1| HM:SCP:REP 14->70|4crxA2|2.2e-11|35.1|57/212|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 43 OP:NHOMOORG 22 OP:PATTERN -------------------------------------------------------------------- --3-----------------------------1------1---1-----------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3----------1-------------------------------3-----1--11---2-----2-----------------2----------------------------------------1--------------------2-----------71-----1------1-----1----------------6---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 68 STR:RPRED 91.9 SQ:SECSTR ######HTccccTTcHHHHHHHHHHHHHHHTTccHHHHHHHHTcccHHHHHTTGGGccccGGGHHHHcTTTccc DISOP:02AL 1-7, 70-74| PSIPRED ccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHccccccc //