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Streptomyces avermitilis MA-4680 (save0)
Gene : pvdS
DDBJ      :pvdS         putative regulatory protein
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  420/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.88.1c.37.1
:267 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->224 3czqD PDBj 2e-56 53.6 %
:RPS:PDB   5->225 3czqB PDBj 6e-29 40.4 %
:RPS:SCOP  16->103 1do0A  c.37.1.20 * 4e-04 19.3 %
:RPS:SCOP  120->227 1b4uA  a.88.1.1 * 4e-13 14.7 %
:HMM:SCOP  39->235 2ocpA1 c.37.1.1 * 4e-33 19.0 %
:RPS:PFM   14->225 PF03976 * PPK2 3e-54 52.4 %
:HMM:PFM   11->233 PF03976 * PPK2 5.2e-110 65.0 223/229  
:BLT:SWISS 40->121 KTHY_DESPS 1e-05 40.2 %
:BLT:SWISS 128->218 YUF2_PLEBO 2e-14 35.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68984.1 GT:GENE pvdS GT:PRODUCT putative regulatory protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1581753..1582556 GB:FROM 1581753 GB:TO 1582556 GB:DIRECTION + GB:GENE pvdS GB:PRODUCT putative regulatory protein GB:NOTE PF03976: Domain of unknown function (DUF344) GB:PROTEIN_ID BAC68984.1 LENGTH 267 SQ:AASEQ MAGKKTARVPRAAYEQELLRLQTELVKLQEWVRAEGARLVIVFEGRDAAGKGSTIKRVAEHLNPRQARIVALPKPTERERTQWYFQRYVEHLPAAGEIVLFDRSWYNRAGVEHVMGFCTKEEHQLFLRQCPIFERMLVEEGILLRKYWFSVSDAVQQERFRRRMKDPTRRWKLSPMDLESITRWEAYSRAKDEMLVHTDISEAPWFVVESDDKRRARLNMMAHLLGSVPYYEVPPPVLELPRRPPSTGYERPPRDLQTYVPDHAASL GT:EXON 1|1-267:0| BL:SWS:NREP 2 BL:SWS:REP 40->121|KTHY_DESPS|1e-05|40.2|82/202| BL:SWS:REP 128->218|YUF2_PLEBO|2e-14|35.2|91/136| SEG 229->245|pyyevpppvlelprrpp| BL:PDB:NREP 1 BL:PDB:REP 8->224|3czqD|2e-56|53.6|209/277| RP:PDB:NREP 1 RP:PDB:REP 5->225|3czqB|6e-29|40.4|213/278| RP:PFM:NREP 1 RP:PFM:REP 14->225|PF03976|3e-54|52.4|212/229|PPK2| HM:PFM:NREP 1 HM:PFM:REP 11->233|PF03976|5.2e-110|65.0|223/229|PPK2| RP:SCP:NREP 2 RP:SCP:REP 16->103|1do0A|4e-04|19.3|88/406|c.37.1.20| RP:SCP:REP 120->227|1b4uA|4e-13|14.7|102/132|a.88.1.1| HM:SCP:REP 39->235|2ocpA1|4e-33|19.0|195/0|c.37.1.1|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 665 OP:NHOMOORG 431 OP:PATTERN -------------------------------------------31--1--212--------------- -221232222222331111-12--1211111122221433-2-22123----221232----211-1112-1111111-112------111--------1-1111111-1---------------11-1111111111122---1-1111112--111111111111122--1-----1----111--------111-11111111111------111---1-11-------11--------------1111---1-11-1---111111-------------------------------------------------------------------------------11--11------------------1-21111-----223332-111222111111111-1-32322212121-1111223323331411122322222232222222211122211------------------------------1-211322-12222222122122262222122324555-23313214224122211511212211-------1-12----2----------1-11111----1-21--311111121---1-------113141111-11---1------------------------1112-----------1-------------------------------111---------------------1------------------------1---------1-1------------------11111122231333332223243321111111111111---11111111-111111112111-----12-121111----------------------------------------------112 --------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1-------11-----3---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 224 STR:RPRED 83.9 SQ:SECSTR ####ccccccHHHHHHHHHHHHHHHHHHHHHHHHcHccEEEEEEEcTTccHHHHHHHHHTTHcTTTEEEEccccccHHHHTccTTHHHHTTcccTTcEEEEcccGGGGTTHHHHTcccHHHHHHHHHHHHHHHHHHHHTEHHHHEEEEEEEEccHHHHHHHHHHHHcTTTGGGccHHHHGGGGHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHHHH####################################### DISOP:02AL 1-13| PSIPRED ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHcccccEEEEEEEccccHHHHcccHHHHHHHHcccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccHHHHHHHHHHHHccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEcccHHccc //