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Streptomyces avermitilis MA-4680 (save0)
Gene : rhsA
DDBJ      :rhsA         putative Rhs protein
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  221/915 : Eukaryota  10/199 : Viruses  0/175   --->[See Alignment]
b.68.9
:1250 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   351->664 3ckaA PDBj 6e-28 14.0 %
:RPS:PDB   778->999 3ckaA PDBj 6e-10 11.0 %
:HMM:SCOP  210->522 1rwiA_ b.68.9.1 * 3.9e-09 24.1 %
:RPS:PFM   389->425 PF05593 * RHS_repeat 6e-04 51.4 %
:RPS:PFM   409->444 PF05593 * RHS_repeat 3e-04 50.0 %
:RPS:PFM   451->486 PF05593 * RHS_repeat 4e-07 66.7 %
:RPS:PFM   598->634 PF05593 * RHS_repeat 4e-04 51.4 %
:RPS:PFM   619->655 PF05593 * RHS_repeat 2e-04 56.8 %
:RPS:PFM   916->945 PF05593 * RHS_repeat 9e-05 66.7 %
:HMM:PFM   299->332 PF05593 * RHS_repeat 2.9e-06 32.4 34/38  
:HMM:PFM   372->404 PF05593 * RHS_repeat 1.3e-07 45.5 33/38  
:HMM:PFM   389->424 PF05593 * RHS_repeat 4.8e-12 47.2 36/38  
:HMM:PFM   409->445 PF05593 * RHS_repeat 2e-09 43.2 37/38  
:HMM:PFM   451->488 PF05593 * RHS_repeat 4.7e-16 52.6 38/38  
:HMM:PFM   494->530 PF05593 * RHS_repeat 2.3e-11 56.8 37/38  
:HMM:PFM   538->570 PF05593 * RHS_repeat 2.6e-07 39.4 33/38  
:HMM:PFM   600->634 PF05593 * RHS_repeat 5.4e-09 48.6 35/38  
:HMM:PFM   619->654 PF05593 * RHS_repeat 1.4e-10 55.6 36/38  
:HMM:PFM   662->697 PF05593 * RHS_repeat 8e-06 38.9 36/38  
:HMM:PFM   703->738 PF05593 * RHS_repeat 4.8e-08 41.7 36/38  
:HMM:PFM   743->768 PF05593 * RHS_repeat 1e-05 53.8 26/38  
:HMM:PFM   783->817 PF05593 * RHS_repeat 0.00043 50.0 30/38  
:HMM:PFM   811->840 PF05593 * RHS_repeat 0.00083 33.3 30/38  
:HMM:PFM   831->858 PF05593 * RHS_repeat 0.00015 46.4 28/38  
:HMM:PFM   916->945 PF05593 * RHS_repeat 1.7e-11 53.3 30/38  
:HMM:PFM   1020->1049 PF03527 * RHS 6.3e-09 46.7 30/41  
:HMM:PFM   42->91 PF11247 * DUF2675 0.00036 30.0 50/98  
:HMM:PFM   1062->1075 PF08265 * YL1_C 0.00048 57.1 14/30  
:BLT:SWISS 273->1138 RHSC_ECOLI 6e-51 31.5 %
:REPEAT 5|373->434|457->518|541->602|604->665|728->787
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC67730.1 GT:GENE rhsA GT:PRODUCT putative Rhs protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(25699..29451) GB:FROM 25699 GB:TO 29451 GB:DIRECTION - GB:GENE rhsA GB:PRODUCT putative Rhs protein GB:NOTE PF05593: RHS Repeat GB:PROTEIN_ID BAC67730.1 LENGTH 1250 SQ:AASEQ MTLSGLVSTAAHPERVVQAAVDGFKKDPSEFVGRLIPELIGTKGAGLARGGMRLALKEGMEGVAEQGLRKTARNAVEDAAEDASRQRGAKICEKDPVDVATGRMVLPQIDVSLPGQLPLVVKRQFESSYRLGGWFGPTWSSTLDQRLEVDTAGVVLVGEDGLVLAYPHPAPGVPTLPSHGPRWSLDRTDGGYTLTDQKSGHIRHFVDRSDTLAVLEQLDDRNGNWITFEYDADGAPRYLTHSGGYRLRISTEAGRVTALHLASAAVDGGDQDLIRYGYTDGHLTEVVNSSGRPLQYVCDELGRITSWTDTNDSHFSYAYDDEDRCTHQSGAAGHLRSTFAYGAVDPGTGAHTTTVTDSYGQTTHYLINRRCQVIAETDALGAVTRYQRDRYNRLLSQTDPLGHTTSFRYDDAGNLVAATRPDGREARAEYNALGLPVKLVNPDGTITRQTFDERGNLTSVTDPSGQTTRFGYDEGGRLTSMTDPLGHTTGIVCDRAGLPLTVTDPLGAVTRYERDAFGRTTAITDPTGATTRLEWTVEGHLSRRTAPDGTSESWTYDGEGNCTSHTDPVGGVSLFEYTHFDLPTARTGPDGVRYEFEHDTELRLSQVTNPHGLTWNYAYDAAGRLVAETDFDNRTLTYEYDFAGRLASRTNALGQMIAFERNELGQIVRKDAAGQATTYAYDFTDQLAQATGPDGTALTILRDRHGRMISEAVNGRALTYDYDELGRRTRRTTPSSATTIWSYDVAGRRTSMTGSGRSIDFVYDEAGRELGRRFGHITLEHSFDALGRLTSQSVLGPAGRRTQHRQYTYRADGHLIGIEDQLSGKRRFDLDLAGRVTAVHAVNWTETYAYDAVGNQTSASWPAGHPGQEAIGNRTYTGTSLTRAGQVRYEHDGLGRIILRQKTRLSRKPDTWRYTWDAEDRLTSVTTPDGTRWRYTYDPLGRRTAKLRLAEDGETLVERVDFTWDGTVLCEQTTTSPDLPHQVTLTWDHQGLRPVTQTERIVAADAPQQEIDSRFFAIVTDLVGTPSELLDERGEIVWRTRATLWGSTTWAKNSTAYTPLRFPGQYYDPETGLHYNYFRHYDPETARYVTPDPLGLGPAPNPAAYVPNPHMWADPLGLKCEPPEGYTSQPAFKNDPYHPDAVERGINEMRELYGIKERPPSGMIGANGTQVTSKTMWNHGPYRIDVENPNPGQRAGQLHFQDQSNPTAKYQYNFDEGKFDGLPRSVEREVGKIPGFEAGIRKGLRVLGED GT:EXON 1|1-1250:0| BL:SWS:NREP 1 BL:SWS:REP 273->1138|RHSC_ECOLI|6e-51|31.5|812/1397| NREPEAT 1 REPEAT 5|373->434|457->518|541->602|604->665|728->787| SEG 44->56|gaglarggmrlal| SEG 153->164|gvvlvgedglvl| SEG 520->531|ttaitdptgatt| SEG 727->733|rrtrrtt| SEG 1091->1109|pdplglgpapnpaayvpnp| RP:PDB:NREP 2 RP:PDB:REP 351->664|3ckaA|6e-28|14.0|278/315| RP:PDB:REP 778->999|3ckaA|6e-10|11.0|203/315| RP:PFM:NREP 6 RP:PFM:REP 389->425|PF05593|6e-04|51.4|37/38|RHS_repeat| RP:PFM:REP 409->444|PF05593|3e-04|50.0|36/38|RHS_repeat| RP:PFM:REP 451->486|PF05593|4e-07|66.7|36/38|RHS_repeat| RP:PFM:REP 598->634|PF05593|4e-04|51.4|37/38|RHS_repeat| RP:PFM:REP 619->655|PF05593|2e-04|56.8|37/38|RHS_repeat| RP:PFM:REP 916->945|PF05593|9e-05|66.7|30/38|RHS_repeat| HM:PFM:NREP 19 HM:PFM:REP 299->332|PF05593|2.9e-06|32.4|34/38|RHS_repeat| HM:PFM:REP 372->404|PF05593|1.3e-07|45.5|33/38|RHS_repeat| HM:PFM:REP 389->424|PF05593|4.8e-12|47.2|36/38|RHS_repeat| HM:PFM:REP 409->445|PF05593|2e-09|43.2|37/38|RHS_repeat| HM:PFM:REP 451->488|PF05593|4.7e-16|52.6|38/38|RHS_repeat| HM:PFM:REP 494->530|PF05593|2.3e-11|56.8|37/38|RHS_repeat| HM:PFM:REP 538->570|PF05593|2.6e-07|39.4|33/38|RHS_repeat| HM:PFM:REP 600->634|PF05593|5.4e-09|48.6|35/38|RHS_repeat| HM:PFM:REP 619->654|PF05593|1.4e-10|55.6|36/38|RHS_repeat| HM:PFM:REP 662->697|PF05593|8e-06|38.9|36/38|RHS_repeat| HM:PFM:REP 703->738|PF05593|4.8e-08|41.7|36/38|RHS_repeat| HM:PFM:REP 743->768|PF05593|1e-05|53.8|26/38|RHS_repeat| HM:PFM:REP 783->817|PF05593|0.00043|50.0|30/38|RHS_repeat| HM:PFM:REP 811->840|PF05593|0.00083|33.3|30/38|RHS_repeat| HM:PFM:REP 831->858|PF05593|0.00015|46.4|28/38|RHS_repeat| HM:PFM:REP 916->945|PF05593|1.7e-11|53.3|30/38|RHS_repeat| HM:PFM:REP 1020->1049|PF03527|6.3e-09|46.7|30/41|RHS| HM:PFM:REP 42->91|PF11247|0.00036|30.0|50/98|DUF2675| HM:PFM:REP 1062->1075|PF08265|0.00048|57.1|14/30|YL1_C| HM:SCP:REP 210->522|1rwiA_|3.9e-09|24.1|241/0|b.68.9.1|1/1|NHL repeat| OP:NHOMO 695 OP:NHOMOORG 233 OP:PATTERN --------------------------------------------------11---------------- --2-6----------------------------------3---1-----111-12--1--12-4432242------------------3----1------2----2------------------1-----------1------15-----1---------------1---1---------------------1-11111-2---112-2----11----2-2---111-212-------------------------------------------------------------------------------------------2---1-------1--1---------6---------6---1------1------1-----------------------------------2-1----1----------------------1-11-----------------------------------------------------------53223273333532-3543-3515--13----F--E--8---31--1----3----------1----6-7------1-----6-111211---12F-3----------------------------11-3--------11-51--------1--2--------------3-6--7488-5---73-9839---7-67--324431---32333--212--111122211-4234336---444344-3525-----1---------M------2----------222-131----83413B145-2-35-358-------------2-----11-11323232176C------------22--------2--------------------------------------22 ------------------------------------------------1-------------------------------------------------------------2-----------------------------------------------2----1-1----5--1-----------1--1-----2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 564 STR:RPRED 45.1 SQ:SECSTR ##############################################################################################################################################################################################################################################################################################################################################################EEEEEETTEEEEEEE#########ccccccEEEEEEcTTccEEEEEEcTTccEEEEEEEcTTcccEEEEEEEETTccEEEEEEcEEEEEEcccccEEEEEEcTTccEEEEETccEEEEEEcTTccEEEEEEEcTTccEEEEEEcTTccEEEEEEEcTTccEEEEEcccEEEEEEcTTccEEEEEEcTTcTTccEEEEEEccccEEEEEcccEEEEEEEETTEEEEEEETTccEEEEEEEcTTcEEccccTTTcEEEEEETTTTEEEEEETTEEEEEEEEcTTccEEEEEccTTccccccccEEEccHHHHHHHHE#####ETTTTEEEEEETTEEEEEEEEcTTccEEEEEccTTcccccc#ccEEcccHHH#######################################################EEEEcTTccEEEEE##EETTEEEEEE##EccccccEEEEEEcTTccEEEEEEcTTccEEE#########EEEEcTTcccEEEEEEEETTccEEEEEEcTTccEEEEEcEEEEEEcTTccEEEEEEEcTTccEEEEEEcTTccEEEEEEEcTTccEEEEEEcTTccEEEEEEEcTTccEEEEE##EEEEcccTTccEEEEEEccccEEEEEEcccEEEEEEEE########################################################################################################################################################################################################################################################### DISOP:02AL 1-4, 71-85, 1193-1205, 1249-1250| PSIPRED ccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccccccccccccccccEEEEEEEEEEcccccEEEEEEEccccccccccccccccccEEEEEEEccEEEEEcccccEEEEEEccccEEEEccccEEEEEEEcccEEEEEEccccEEEEEEEccccEEEEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEEcccEEEEEEEEEEEEccccEEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEEcccccEEEEEcccccEEEEEEEEEEccccccEEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEcccccEEEEEEEccccEEEEEEcccEEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEcccccEEEEEEEccccEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEccccEEEEEEEcccccEEEEEcccEEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEcccEEEEEEEcccccEEEEEEcccEEEEEEcccccEEEEEEEcccccEEEEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEccEEcccccccccEEEEEEcccccEEEEccccccccccEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEEEEEcccccEEEEEEEccccccEEEEEEEccccEEEEEEEEEEccccccccccccEEEEEEEcccccEEEEEcccccEEEEEEccccccEEccccccccccEEEEEEEEcHHHHHHHcccccccHHHcEEEccccccccccccEEEEEccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccEEccccccccEEEEEEcccccccccccccccccccEEEEEccccccccEEEEcccccEEccccHHHccccccccccccHHHHHHHcccc //