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Streptomyces avermitilis MA-4680 (save0)
Gene : rpiB1
DDBJ      :rpiB1        putative ribose-5-phosphate isomerase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  220/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
c.121.1
:156 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->120 1nn4D PDBj 3e-12 35.0 %
:RPS:SCOP  1->120 1uslA  c.121.1.1 * 2e-09 28.3 %
:HMM:SCOP  1->155 1uslA_ c.121.1.1 * 1.3e-37 34.8 %
:RPS:PFM   2->120 PF02502 * LacAB_rpiB 1e-16 38.1 %
:HMM:PFM   12->136 PF02502 * LacAB_rpiB 6.8e-36 37.4 123/140  
:BLT:SWISS 1->120 LACB_CLOAB 4e-12 34.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69258.1 GT:GENE rpiB1 GT:PRODUCT putative ribose-5-phosphate isomerase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1890784..1891254) GB:FROM 1890784 GB:TO 1891254 GB:DIRECTION - GB:GENE rpiB1 GB:PRODUCT putative ribose-5-phosphate isomerase GB:NOTE PF02502: Ribose/Galactose Isomerase GB:PROTEIN_ID BAC69258.1 LENGTH 156 SQ:AASEQ MRISVSSDMDEPVARSLLAELRGRGHEVVAHGALRPGDDTRWAACSAAAAREVATGTSDQAVVCCWTGTGASIAANKVPGVRAALCTDAYTADGARRWNDANVLALSLRLTSQPLLREILDAWFAAEAGEDADDRENVAHVGRLDADRTGGAADRG GT:EXON 1|1-156:0| BL:SWS:NREP 1 BL:SWS:REP 1->120|LACB_CLOAB|4e-12|34.5|119/173| SEG 43->54|aacsaaaareva| SEG 121->136|dawfaaeagedaddre| BL:PDB:NREP 1 BL:PDB:REP 17->120|1nn4D|3e-12|35.0|103/159| RP:PFM:NREP 1 RP:PFM:REP 2->120|PF02502|1e-16|38.1|118/140|LacAB_rpiB| HM:PFM:NREP 1 HM:PFM:REP 12->136|PF02502|6.8e-36|37.4|123/140|LacAB_rpiB| GO:PFM:NREP 1 GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF02502|IPR003500| RP:SCP:NREP 1 RP:SCP:REP 1->120|1uslA|2e-09|28.3|120/156|c.121.1.1| HM:SCP:REP 1->155|1uslA_|1.3e-37|34.8|155/157|c.121.1.1|1/1|Ribose/Galactose isomerase RpiB/AlsB| OP:NHOMO 252 OP:NHOMOORG 228 OP:PATTERN --1-------------1--------------------------------------------------- -12-1-----------------------------------------1----------------1-1-11---------1-11-111-----------------1---------------------1-1---11---111--1121-------------------1-1--1------------------11--111111111111111112111111111111---222323111-------------------------------------------11--------------------------------------------111211111111111211111111-1-121111111-1--11121-1--1-11---------------------111111111111---1-----1---1---11212122------------111-----------1-1-1------------------------------11---------------1111----1111--------------1----1-1--1--------------------------1----11111-1-1121--1--1----11-------------------11--1----2----------------------------------------1-1-1--1--11111----111111-1--1-11111211111---------------------------------------------------------11---2-1--------1---------------------------------------------------------------------1-111111--------1----------------------------1----------- --------2111--------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 120 STR:RPRED 76.9 SQ:SECSTR cEEEEEEcHHHHHHHHHHHHHHHTTcEEEEcccccccccccHHHHHHHHHHHHHTTcccEEEEEEcccHHHHHHHHTcTTccEEEcccHHHHHHHHHHHcccEEEEETTTccHHHHHHHH#################################### DISOP:02AL 146-156| PSIPRED cEEEEEccccHHHHHHHHHHHHHcccEEEEEcccccccccccHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHcccccEEEEEEEcHHHHHHHHHHcccEEEEEccEEccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccc //