[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : tpc1
DDBJ      :tpc1         putative terpene cyclase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  20/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
a.128.1
:335 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->293 1ps1A PDBj 6e-37 31.3 %
:RPS:PDB   9->314 3bnyA PDBj 1e-22 17.2 %
:RPS:SCOP  5->307 1hm4A  a.128.1.4 * 8e-32 28.8 %
:HMM:SCOP  3->312 1ps1A_ a.128.1.4 * 1.3e-58 25.9 %
:RPS:PFM   120->256 PF03936 * Terpene_synth_C 1e-09 34.1 %
:HMM:PFM   54->262 PF03936 * Terpene_synth_C 5.2e-20 22.2 198/270  
:BLT:SWISS 1->332 PTLS_STRS3 1e-41 30.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC67785.1 GT:GENE tpc1 GT:PRODUCT putative terpene cyclase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 86073..87080 GB:FROM 86073 GB:TO 87080 GB:DIRECTION + GB:GENE tpc1 GB:PRODUCT putative terpene cyclase GB:NOTE PF03936: Terpene synthase family, metal binding domain GB:PROTEIN_ID BAC67785.1 LENGTH 335 SQ:AASEQ MPQDIDFGLPAPAGISPGLEATRRHNLGWVRRLGLVGDGPSLAWYTSWDMPRLAACGFPHARGAALDLCADAMAFFFVFDDQFDGPLGRDPARAARVCRRLTGIVHGAGPGPGADACSAAFADVWARSTDGAHPGWVARTAHEWEYYFAAQAHEAINRLRGTPGDMESYLQVRRGIAGTDLPLSLGERAAGITVPAAAFHSPQLRIMREAAIDVTLMCNDVYSLEKEEARGDMDNLVLVIEHARRCTRDEAVTAARGEVARRVIRFEQLAREVPALCAQLGLSAVERAHVDTYLGVMEAWMSGYHAWQTQTRRYTGAPHVLPSTGPGYFDEVLPT GT:EXON 1|1-335:0| BL:SWS:NREP 1 BL:SWS:REP 1->332|PTLS_STRS3|1e-41|30.9|330/337| SEG 70->84|adamafffvfddqfd| BL:PDB:NREP 1 BL:PDB:REP 3->293|1ps1A|6e-37|31.3|284/304| RP:PDB:NREP 1 RP:PDB:REP 9->314|3bnyA|1e-22|17.2|285/294| RP:PFM:NREP 1 RP:PFM:REP 120->256|PF03936|1e-09|34.1|135/264|Terpene_synth_C| HM:PFM:NREP 1 HM:PFM:REP 54->262|PF03936|5.2e-20|22.2|198/270|Terpene_synth_C| GO:PFM:NREP 2 GO:PFM GO:0000287|"GO:magnesium ion binding"|PF03936|IPR005630| GO:PFM GO:0016829|"GO:lyase activity"|PF03936|IPR005630| RP:SCP:NREP 1 RP:SCP:REP 5->307|1hm4A|8e-32|28.8|285/289|a.128.1.4| HM:SCP:REP 3->312|1ps1A_|1.3e-58|25.9|309/0|a.128.1.4|1/1|Terpenoid synthases| OP:NHOMO 57 OP:NHOMOORG 27 OP:PATTERN -------------------------------------------------------------------- ----1-------------------1----------------221--------------------1-3313------------1----------------------3---------------------------------11---2----------------------112---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------13-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------1--------------------------------2B4-311------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 313 STR:RPRED 93.4 SQ:SECSTR ##ccccccccccccccTTHHHHHHHHHHHHHHHcccccHHHHHHHHHHcHHHHHHHHcTTccTTTHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHTcccccTTcHTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTccccccccccHHHHHHHHHTcHHHHHHHHHHHHHHTccccHHHHHHTHcHHHHHHHHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHcGGGc#################### PSIPRED ccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcHHcccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccHHHHHHHHHHHHHHHccccccHHHHHcHHHHHHHHHHHHHHHHHcccccHHHHHHccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHccc //