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Streptomyces avermitilis MA-4680 (save0)
Gene : xynB1
DDBJ      :xynB1        putative xylan 1,4-beta-xylosidase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  44/915 : Eukaryota  10/199 : Viruses  0/175   --->[See Alignment]
b.71.1c.1.8
:507 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->490 2bs9A PDBj e-149 50.4 %
:RPS:PDB   44->194 2c8nF PDBj 2e-04 12.2 %
:RPS:PDB   266->358 2e9lA PDBj 1e-06 22.6 %
:RPS:SCOP  16->357 1px8A2  c.1.8.3 * 2e-16 45.7 %
:RPS:SCOP  357->493 1px8A1  b.71.1.2 * 6e-42 36.6 %
:HMM:SCOP  12->357 1w91A2 c.1.8.3 * 4.3e-84 32.7 %
:HMM:SCOP  344->502 1uhvA1 b.71.1.2 * 1.9e-38 37.3 %
:RPS:PFM   32->481 PF01229 * Glyco_hydro_39 e-109 48.5 %
:HMM:PFM   5->483 PF01229 * Glyco_hydro_39 8.4e-131 34.9 470/486  
:BLT:SWISS 1->490 XYNB_BACST e-143 49.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC69163.1 GT:GENE xynB1 GT:PRODUCT putative xylan 1,4-beta-xylosidase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1790131..1791654) GB:FROM 1790131 GB:TO 1791654 GB:DIRECTION - GB:GENE xynB1 GB:PRODUCT putative xylan 1,4-beta-xylosidase GB:NOTE PF01229: Glycosyl hydrolases family 39 GB:PROTEIN_ID BAC69163.1 LENGTH 507 SQ:AASEQ MISVPAEATGRLSDAWRACVGTGRIELALRRDYQDSLALLQREIGFRYIRGHGLLSDGMGVYRPYAYEGARRVHHSFTYVDQVVDAYLGLHVRPFLELGFMPTELASGDQTVFWWRGNVTPPRSYDEWARLVRATLTHLVDRYGIEEVRTWPIEVWNEPNLTDFWQGADEAEYHRLYEVTARTVKDVDASLQVGGPAISPGADEWLLRFAEFAERREVPVDFVSRHAYTSGPARPVPFGAYQTLAPARRLLDQFARPREQLKGTRYTELPVHITEFNSSYRPDNPIHDTAFHAAYLAPVLAAGGDHADSFSYWTFSDMFEESGVPTALFHGGFGLLTHRQVKKPTYHLYAFMARMGEELLERGDDHLVTRHPDGRVTVLAWAPVDETGRTPGPDRHTLRLSVPVGRRPRGAAFVRRSTVDEEHGNAWTAWRHMGGPRSPRPHQIDLLHEAAEPARSHLRLPVEDFRADLGLTLARHEVTLVELSPVEDETPPWWDERRLLGSPVEPR GT:EXON 1|1-507:0| BL:SWS:NREP 1 BL:SWS:REP 1->490|XYNB_BACST|e-143|49.7|483/504| BL:PDB:NREP 1 BL:PDB:REP 1->490|2bs9A|e-149|50.4|484/501| RP:PDB:NREP 2 RP:PDB:REP 44->194|2c8nF|2e-04|12.2|139/500| RP:PDB:REP 266->358|2e9lA|1e-06|22.6|93/466| RP:PFM:NREP 1 RP:PFM:REP 32->481|PF01229|e-109|48.5|435/453|Glyco_hydro_39| HM:PFM:NREP 1 HM:PFM:REP 5->483|PF01229|8.4e-131|34.9|470/486|Glyco_hydro_39| GO:PFM:NREP 2 GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF01229|IPR000514| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF01229|IPR000514| RP:SCP:NREP 2 RP:SCP:REP 16->357|1px8A2|2e-16|45.7|339/346|c.1.8.3| RP:SCP:REP 357->493|1px8A1|6e-42|36.6|131/154|b.71.1.2| HM:SCP:REP 12->357|1w91A2|4.3e-84|32.7|346/0|c.1.8.3|1/1|(Trans)glycosidases| HM:SCP:REP 344->502|1uhvA1|1.9e-38|37.3|153/155|b.71.1.2|1/1|Glycosyl hydrolase domain| OP:NHOMO 62 OP:NHOMOORG 55 OP:PATTERN -----------------------------------------------1-------------------- 3-111----------------------------------------1--1---------------1--1---------------------------------1---2-1-1------------------------------------------------------------------------------1---------------------1---------1-----------1------------------------------------------------------------------------------------------2-1-1111111111-1------------------------------2------111--------------------------------------------------11--------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------12-----------------------------------------------------------------------------------1-------------------------------------------11-11----------------------------------------------------------------1- ----111-------------------1--------------------------------------------------------------------------------121---1--------1---------------------------------------------------------------------------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 494 STR:RPRED 97.4 SQ:SECSTR EEEccccccccccGGGGTEEEEccGGGGGcHHHHHHHHHHHHHHTccEEEEEEEGGGTcccccTTcccTEEccHHHHHHHHHHHHHHHHHTcEEEEEEEEccGGGcccccEEcccccTTTcHHHHHHHHHHHHHHHHHHHHHTTHTccccEEEEccccccccccHHGGcHHHHHHHHHHHHHHHHHHcccccEEEEcHHHHcTTcGGGccccccccEEHHHHcccccccEEcccHHHHHHHcGGGGGGGGGTTcEEcHHHHHHHHTTcccEEEEEEcccEEcccccccHHHHHHHHHHHHHTTcccEEEEEEEcccccccGGGEEcccEEEcTTcTTccEEEcHHHHHHHHHHHTccccEEEEEETTEEEEEcTTEEEEEccEEEEEEEccccccccccEEEEEEEccccEEEEEEEEEccccccHHHHHHHTTccccccHHHHHHHHHHTccEEEEEEEEccTTEEEEEEEEcTTEEEEEEEEEccccGGGcT############# DISOP:02AL 502-507| PSIPRED cEEcccccccccccccccEEEcccHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEcccEEEEEEEEccccccEEcHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHccccEEccccccccccHHHHHHHHHHHHccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccccccEEEcccccccHHHHHHHHHHHccccEEEccccEEEEEccccEEEEEEEEccccccccccccccEEEEEEEccccccccEEEEEEEcccccccHHHHHHHccccccccHHHHHHHHHHHccHHHcccccccccEEEEEEEEccccEEEEEEEEEccccccccccccccccccccc //