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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF65845.1
DDBJ      :             nickel ABC transporter, periplasmic nickel-binding protein
Swiss-Prot:             

Homologs  Archaea  23/68 : Bacteria  591/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:544 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   74->485 1xocA PDBj 2e-31 28.9 %
:RPS:PDB   46->541 3dp8A PDBj 1e-74 20.3 %
:RPS:SCOP  48->515 1uiuA  c.94.1.1 * 7e-74 21.1 %
:HMM:SCOP  42->518 1xocA1 c.94.1.1 * 1.3e-89 32.0 %
:RPS:PFM   92->444 PF00496 * SBP_bac_5 2e-35 33.6 %
:HMM:PFM   89->447 PF00496 * SBP_bac_5 1.8e-90 32.5 345/372  
:BLT:SWISS 43->512 XP55_STRLI 2e-44 32.3 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF65845.1 GT:GENE ACF65845.1 GT:PRODUCT nickel ABC transporter, periplasmic nickel-binding protein GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 1344164..1345798 GB:FROM 1344164 GB:TO 1345798 GB:DIRECTION + GB:PRODUCT nickel ABC transporter, periplasmic nickel-binding protein GB:NOTE identified by match to protein family HMM PF00496 GB:PROTEIN_ID ACF65845.1 GB:DB_XREF GI:194405626 LENGTH 544 SQ:AASEQ MLRREKQKQRIIWDKLMIKGKLALVTCALTLVFTSSLFAASDTADGRTLKLAIGPEPTEGFDPMLGWSHGSYLLLHAPLLKQNADMSWGNLLTEKVDTSPDGKIWTLTLKPGLKFSDGSPLTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTLSHPQSTFVNVLGSLGIVPASRYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAARSGQLGLVRIAPSMAVAPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANGYPVGNDVTADVAIRRAINYAINRKQLAEQVMEGHAIPAYSAVQGLPWQNPSVVFSDGDIAKARAILEEAGWKINRAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAMLQPLGIVVSLQSGSWETVERHMHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIPFWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGAPEIHGSWSVLNNLDDWTWTCR GT:EXON 1|1-544:0| BL:SWS:NREP 1 BL:SWS:REP 43->512|XP55_STRLI|2e-44|32.3|443/542| BL:PDB:NREP 1 BL:PDB:REP 74->485|1xocA|2e-31|28.9|395/504| RP:PDB:NREP 1 RP:PDB:REP 46->541|3dp8A|1e-74|20.3|474/498| RP:PFM:NREP 1 RP:PFM:REP 92->444|PF00496|2e-35|33.6|330/366|SBP_bac_5| HM:PFM:NREP 1 HM:PFM:REP 89->447|PF00496|1.8e-90|32.5|345/372|SBP_bac_5| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF00496|IPR000914| GO:PFM GO:0006810|"GO:transport"|PF00496|IPR000914| RP:SCP:NREP 1 RP:SCP:REP 48->515|1uiuA|7e-74|21.1|454/496|c.94.1.1| HM:SCP:REP 42->518|1xocA1|1.3e-89|32.0|453/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 2223 OP:NHOMOORG 616 OP:PATTERN --11------------1-1111-1----1--112-----------4-43-E85-2-2---1-1-1--- 11112553333-21-2211-12--1611111111112847-5-A497413224742-211441163636B-5444755212-311111-----------------------------1----------------1-55564---86232133222111-----21124233------------8211121-61155555355344533475445-5441-2731-111111N6-111111112111121----111-------------------11232233222----11-------111111111111112---11---2-9322222221222322---11112213A--129A631--51-225-28521-----1----32DDQ-13553726668688768F-2292171BHJ1-YJJJ8A8GFFINJ4-1-58C4355576--------1222-264-------------------------------2---CDABB34444312222113322221223973A6--435115455-A2CI11--311---------------144-12242232231111111211----14111111-1111111-111-111-2-1122332-12-1--1-1111--1------1--1----2111------67E94576554653545-55555445555544555559A9A75434544445445545446944444351-322222222222---------------332444-121111-51122221212--13343344948244342877-----------12244444--222--1--------------71111112-11111-1----------------------------21114852211- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 516 STR:RPRED 94.9 SQ:SECSTR ############################ccccccccEEcccccccTTEEEEEEcccccccccTTccTTccHHHHHccccEEEcTTccEEEccEEEEEEcTTccEEEEEEcccccccccccccHHHHHHHHTTGGGGTTcHHHHHEEEEEEccccEEEEEEccccTTHHHHHTcccccccccTccTTccccccccccEEEEEEETTTEEEEEEccccccccccccEEEEEEccHHHHHHHHHTTcccEEEEcTTcccHHHHHHHHEEEEEccTcTTcEEEEEEEEEEEEEEEcTTcTTTTcHHHHHHHHHHccHHHHHHHHTTTccEEcccccTTcTTcccccccccccHHHHHHHHHHTTcccTTccccEETTEEcEEEEEEETTcHHHHHHHHHHHHHHHTTTcEEEEEEEcHHHHHHHTcccEEEEEccTTTTHHHHHHTTccccHHHHHHTTcTTHHHHHHHHHHHHHcccHHHHHHHHHHHHHHEEcTHHHHHTTcEEEEEEEEEEEEEcGGGETccccccEcccccccTTcccGGGcGG DISOP:02AL 1-8,38-45| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEcccccccccccccccccEEEEEEEccEEEcccccEEEEEEEEEEEcccccEEEEEEccccEEcccccccHHHHHHHHHHHHccccHHHHHHcccEEEccccEEEEEEccccHHHHHHHcccccccHHHHccccccccccccccEEEEEEEcccEEEEEEccccccccccEEEEEEEEccHHHHHHHHHccccEEEEcccHHHHHHHHccccEEEEEcccccEEEEEEcccccEEEEEccccccccccHHHHHHHHHHHcHHHHHHHHHccccEEEccccccccccccccccccccHHHHHHHHHHcccccccccEEccccccEEEEEEEccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccccEEEEEcccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccEEEEEEccEEEEEEcccEEEEEcccccccccccccHHHEEEEcc //