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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF65849.1
DDBJ      :             alkylhydroperoxidase AhpD family core domain protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  260/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.152.1
:144 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->143 2gmyD PDBj 6e-29 43.0 %
:RPS:PDB   9->144 3c1lH PDBj 2e-18 23.5 %
:RPS:SCOP  6->144 2gmyA1  a.152.1.3 * 1e-28 42.4 %
:HMM:SCOP  4->144 2o4dA1 a.152.1.3 * 1e-39 39.0 %
:RPS:PFM   15->94 PF02627 * CMD 2e-07 38.5 %
:HMM:PFM   14->95 PF02627 * CMD 1.3e-23 35.4 82/85  
:BLT:SWISS 6->142 YDFG_BACSU 5e-23 34.3 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF65849.1 GT:GENE ACF65849.1 GT:PRODUCT alkylhydroperoxidase AhpD family core domain protein GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 2925662..2926096 GB:FROM 2925662 GB:TO 2926096 GB:DIRECTION + GB:PRODUCT alkylhydroperoxidase AhpD family core domain protein GB:NOTE identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778 GB:PROTEIN_ID ACF65849.1 GB:DB_XREF GI:194405630 LENGTH 144 SQ:AASEQ MMTTLRQPYYELSPEVYSALVQAKNALEKSTLDLTLMELIYLRVSQINGCAFCLEMHSKALRKAGVNQAKLDALAGWRVSHHFSEQECAALAWAESVTHIAETHAEDNVYLPLLDHFSAREISDLTFAIGLMNCFNRLAIGMRM GT:EXON 1|1-144:0| BL:SWS:NREP 1 BL:SWS:REP 6->142|YDFG_BACSU|5e-23|34.3|137/147| BL:PDB:NREP 1 BL:PDB:REP 9->143|2gmyD|6e-29|43.0|135/145| RP:PDB:NREP 1 RP:PDB:REP 9->144|3c1lH|2e-18|23.5|132/172| RP:PFM:NREP 1 RP:PFM:REP 15->94|PF02627|2e-07|38.5|78/83|CMD| HM:PFM:NREP 1 HM:PFM:REP 14->95|PF02627|1.3e-23|35.4|82/85|CMD| RP:SCP:NREP 1 RP:SCP:REP 6->144|2gmyA1|1e-28|42.4|139/147|a.152.1.3| HM:SCP:REP 4->144|2o4dA1|1e-39|39.0|141/0|a.152.1.3|1/1|AhpD-like| OP:NHOMO 413 OP:NHOMOORG 262 OP:PATTERN -------------------------------------------------------------------- 12--4--1111--12------1---2------122231551221---1----1-1--1---11-2-3464------------1------------------3---312-2----------------------------------1-1------11-----------2----------------1---------------------------11-1--2---1---------12-111111111111111---1-----------------------------------------------------------------------1------------------------------------------------1--11-1-----2-5111-21-11-----------1-11--11-1131-11112333632211-----11-11-11-------------1----------------------------------11--43224433342111133342222124223453--33----221-2-42-2-----2----------14---------------------1----111122---------------------------1121--1-111--11111--111111-1-111-------------11---1--111-111---1---111-1-111-----1222211--1-111111111111111--1------1--------------------1111----1---------------11111-------111111321-1121----------------1-------11-22---------------------------------------------------------------------2- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 144 STR:RPRED 100.0 SQ:SECSTR GccTHHccHGGGcHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHccHHHHHHHcGGGcccccccHHHHHHHHHHHHHHcGGGccHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHTc DISOP:02AL 1-6| PSIPRED ccccccccHHHHcHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcc //