[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF66098.1
DDBJ      :             poly(A) polymerase (PAP) (Plasmid copy number protein)
Swiss-Prot:PCNB_SALTY   RecName: Full=Poly(A) polymerase;         Short=PAP;         EC=2.7.7.19;AltName: Full=Plasmid copy number protein;

Homologs  Archaea  0/68 : Bacteria  762/915 : Eukaryota  175/199 : Viruses  1/175   --->[See Alignment]
a.173.1d.218.1
:437 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->226 1miyA PDBj 1e-17 31.7 %
:RPS:PDB   48->351 3bjdC PDBj 2e-40 12.5 %
:RPS:SCOP  13->160 1ou5A2  d.218.1.4 * 3e-28 27.6 %
:RPS:SCOP  164->365 1ou5A1  a.173.1.1 * 7e-38 16.6 %
:HMM:SCOP  3->162 1ou5A2 d.218.1.4 * 8.3e-42 42.9 %
:HMM:SCOP  163->406 1miwA1 a.173.1.1 * 1.4e-51 33.6 %
:RPS:PFM   48->165 PF01743 * PolyA_pol 2e-23 50.9 %
:HMM:PFM   34->165 PF01743 * PolyA_pol 2.8e-42 42.6 122/126  
:BLT:SWISS 1->437 PCNB_SALTY 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF66098.1 GT:GENE ACF66098.1 GT:PRODUCT poly(A) polymerase (PAP) (Plasmid copy number protein) GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(221557..222870) GB:FROM 221557 GB:TO 222870 GB:DIRECTION - GB:PRODUCT poly(A) polymerase (PAP) (Plasmid copy number protein) GB:NOTE identified by match to protein family HMM PF01743; match to protein family HMM TIGR01942 GB:PROTEIN_ID ACF66098.1 GB:DB_XREF GI:194405879 LENGTH 437 SQ:AASEQ MTIIPREQHAISRKDISENALKVLYRLNKAGYEAYLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGSESDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMQDLQEGVIRLIGNPETRYREDPVRMLRAVRFAAKLNMHISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGNGYETYQQLREYHLFQPLFPTITRYFTENGDSAMERIIAQVLKNTDNRIRNEMRVNPAFLFAAMFWYPLLEMAQKIAQESGLAYYDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLMEHPKFRAAFDLLELRAQVENNTELQRLAQWWAEFQASAPPEQKGMLNELDDDPAPRRRRSRPRKRAPRREGTV GT:EXON 1|1-437:0| SW:ID PCNB_SALTY SW:DE RecName: Full=Poly(A) polymerase; Short=PAP; EC=2.7.7.19;AltName: Full=Plasmid copy number protein; SW:GN Name=pcnB; OrderedLocusNames=STM0184; SW:KW ATP-binding; Complete proteome; mRNA processing; Nucleotide-binding;Plasmid copy control; RNA-binding; Transcription; Transferase. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->437|PCNB_SALTY|0.0|100.0|437/465| GO:SWS:NREP 7 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0006397|"GO:mRNA processing"|mRNA processing| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006276|"GO:plasmid maintenance"|Plasmid copy control| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| SEG 36->47|lvgggvrdlllg| SEG 417->433|paprrrrsrprkraprr| BL:PDB:NREP 1 BL:PDB:REP 18->226|1miyA|1e-17|31.7|189/395| RP:PDB:NREP 1 RP:PDB:REP 48->351|3bjdC|2e-40|12.5|281/320| RP:PFM:NREP 1 RP:PFM:REP 48->165|PF01743|2e-23|50.9|108/123|PolyA_pol| HM:PFM:NREP 1 HM:PFM:REP 34->165|PF01743|2.8e-42|42.6|122/126|PolyA_pol| GO:PFM:NREP 3 GO:PFM GO:0003723|"GO:RNA binding"|PF01743|IPR002646| GO:PFM GO:0006396|"GO:RNA processing"|PF01743|IPR002646| GO:PFM GO:0016779|"GO:nucleotidyltransferase activity"|PF01743|IPR002646| RP:SCP:NREP 2 RP:SCP:REP 13->160|1ou5A2|3e-28|27.6|123/140|d.218.1.4| RP:SCP:REP 164->365|1ou5A1|7e-38|16.6|193/204|a.173.1.1| HM:SCP:REP 3->162|1ou5A2|8.3e-42|42.9|147/152|d.218.1.4|1/1|Nucleotidyltransferase| HM:SCP:REP 163->406|1miwA1|1.4e-51|33.6|241/265|a.173.1.1|1/1|Poly A polymerase C-terminal region-like| OP:NHOMO 1120 OP:NHOMOORG 938 OP:PATTERN -------------------------------------------------------------------- 1111111-11111111111-11--111111111111111111111111111112111111111111111111111111111111121-111111--1--111111111112222222222222221111-111111---------111111112111-1-1--111-1111----------1------21-111111111111111111211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111121-11111111121112211111121-11112222112112-2221-11-21----1-111111----1111111111111111----------11-1---11-----11-1--11-1----111--------111---1-1111111111111-1111111111111111111-11111111111111111111111111111111111111112222211112212111111222222211211121112-11---1---222-1132222222221--1-1-1111111111111111--1222211111111111111111111111111112-11112--2---111-1111111111111-111111111111111111111111111111111111111111111111111111111111111111-112222222212121111121111111111111111111111111111111111111111---------2111111111111112222222222222212-1222222111111112211111---------------------1--11111111-1 -111111-2-1111-11111111111111111111111111111111111121-11111111111-111211111111111111-111-11111111111-21112-1--1121122111--1152111451-11111--211111111-1111111-2111-111-1113--311111F212222335175-242221 ------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------ STR:NPRED 331 STR:RPRED 75.7 SQ:SECSTR #################HHHHHHHHHHHHTTccEEEEcHHHHHHHHTcccHHHHHHTTccHHHHHHcHHHHHHHHHHHHHHHHEETcccGGGHHHHHHHHHHHHHHHHHHcEEEEEcccccccccHHHHHHHHHHHHHHHcGGTTGcHHHHHTTTcccHHHHHHHHHccHHHHHHHHHHHHTTHHHHHHHHHcccHHHHHHHHHHHHHHTTTTcGGGcHHHHHHHHHHHTTccccTTccccHHHHHHHHHHHHHHcccTHHHHHHHHHHHHHTcccHHHHHHHHHHTTccTTTTHHHHTTccc##ccGGGcTTHHH#HHTTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHH###################################################################################### DISOP:02AL 1-1,6-7,403-438| PSIPRED cccccHHHHcccHHHccHHHHHHHHHHHHcccEEEEEcHHHHHHHccccccEEEEEEcccHHHHHHHHHcccEEcccccEEEEEEccEEEEEccccccccccccccccccccccccEEEccccccHHHHHHHcccccHHHHcccccccEEccccHHHHHHcccEEEcccHHHHHHHcHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHcccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccccccHHccccc //