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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF66134.1
DDBJ      :             nitrate reductase, alpha subunit
Swiss-Prot:             

Homologs  Archaea  14/68 : Bacteria  287/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
b.52.2c.81.1
:1246 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->1244 1q16A PDBj 0.0 79.4 %
:RPS:PDB   47->816 2e7zA PDBj 9e-95 13.6 %
:RPS:PDB   1012->1203 1e60A PDBj 1e-23 14.9 %
:RPS:SCOP  2->1068 1q16A2  c.81.1.1 * 0.0 79.2 %
:RPS:SCOP  1077->1244 1q16A1  b.52.2.2 * 9e-42 82.7 %
:HMM:SCOP  2->1073 1q16A2 c.81.1.1 * 0 45.3 %
:HMM:SCOP  1075->1244 1q16A1 b.52.2.2 * 3.7e-49 31.2 %
:RPS:PFM   150->358,659->825 PF00384 * Molybdopterin 1e-34 43.5 %
:RPS:PFM   476->573 PF00384 * Molybdopterin 1e-10 36.8 %
:RPS:PFM   1115->1163 PF01568 * Molydop_binding 6e-10 49.0 %
:HMM:PFM   108->831 PF00384 * Molybdopterin 5.3e-170 51.4 420/432  
:HMM:PFM   1086->1201 PF01568 * Molydop_binding 1.5e-23 29.5 105/109  
:HMM:PFM   53->104 PF04879 * Molybdop_Fe4S4 4.8e-05 28.9 45/55  
:BLT:SWISS 1->1246 NARZ_ECOLI 0.0 90.0 %
:PROS 776->793|PS00490|MOLYBDOPTERIN_PROK_2
:PROS 48->66|PS00551|MOLYBDOPTERIN_PROK_1

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF66134.1 GT:GENE ACF66134.1 GT:PRODUCT nitrate reductase, alpha subunit GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 1709535..1713275 GB:FROM 1709535 GB:TO 1713275 GB:DIRECTION + GB:PRODUCT nitrate reductase, alpha subunit GB:NOTE identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01580 GB:PROTEIN_ID ACF66134.1 GB:DB_XREF GI:194405915 LENGTH 1246 SQ:AASEQ MSKLLDRFRYFKQKGDTFADGHGQVMHTNRDWEDSYRQRWQFDKIIRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLVRKRLIELWREALSRHSDPVLAWESIMNDPQKCQSYKQVRGHGGFIRSNWKELNQLIAAANVWTIKTYGPDRVAGFSPIPAMSMVSYAAGTRYLSLLGGTCLSFYDWYCDLPPASPMTWGEQTDVPESADWYNSAYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTIAITPDYSEVAKLCDQWLAPKQGTDSALAMAMGHVILKEFHLDNPSDYFLNYCRRYTDMPMLVLLDERADGSYVPGRMMRASDLVDGLGEANNPEWKTVALNSTGELVAPNGSIGFRWGEKGKWNLEPVAAGVETELSLSLLGQHDDVAGVAFPYFGGNENPHFRSVRQEPVLVRQLPVKRLALADGSERMVVSVYDLVLANYGLDRGLDDCHSANNYNDVKAYTPAWGEQITGVPRRHIETIAREFAETAHKTHGRSMIILGAGVNHWYHMDMNYRGMINMLVFCGCVGQTGGGWAHYVGQEKLRPQTGWLPLAFALDWNRPPRQMNSTSFFYNHASQWRYEKLTAQELLSPLADPAKFSGHLIDFNVRAERMGWLPSAPQLNLNPLSVKASADKAGLSAADYTVQALKSGAIRFACEQPDSGHNHPRNLFVWRSNLLGSSGKGHEYMLKYLLGTDSGIQGEALGSSEGIKPEEVEWQSAAIEGKLDLLVTLDFRMSSTCLFSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWEIYKGIASVFSEVCVGHLGQETDVVLHPLQHDSPAELAQPFDILDWRKGECELIPGKTAPNIVVVERDYPATYERFTSLGPLLDKLGNGGKGIAWNTQDEVNFLGKLNYTKHDGPAKGRPRIDTALDASEVILALAPETNGQVAVKAWQALGEMTGREHTHLAINKEDEKIRFRDIQAQPRKIISSPTWSGLESEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHAWMRAFGESLVAYRPPIDTRSVSEMREIPPNGFPEKALNFLTPHQKWGIHSTYSENLLMLTLSRGGPIVWISEADARELGIEDNDWIEAFNANGALTARAVVSQRVPPGMTMMYHAQERIMNIPGSEVTGMRGGIHNSVTRVCPKPTHMIGGYAQLAYGFNYYGTVGSNRDEFIMIRKMKNINWLDDEGRDQVQEAKK GT:EXON 1|1-1246:0| BL:SWS:NREP 1 BL:SWS:REP 1->1246|NARZ_ECOLI|0.0|90.0|1246/1246| PROS 776->793|PS00490|MOLYBDOPTERIN_PROK_2|PDOC00392| PROS 48->66|PS00551|MOLYBDOPTERIN_PROK_1|PDOC00392| BL:PDB:NREP 1 BL:PDB:REP 2->1244|1q16A|0.0|79.4|1242/1244| RP:PDB:NREP 2 RP:PDB:REP 47->816|2e7zA|9e-95|13.6|674/727| RP:PDB:REP 1012->1203|1e60A|1e-23|14.9|182/778| RP:PFM:NREP 3 RP:PFM:REP 150->358,659->825|PF00384|1e-34|43.5|357/423|Molybdopterin| RP:PFM:REP 476->573|PF00384|1e-10|36.8|93/423|Molybdopterin| RP:PFM:REP 1115->1163|PF01568|6e-10|49.0|49/112|Molydop_binding| HM:PFM:NREP 3 HM:PFM:REP 108->831|PF00384|5.3e-170|51.4|420/432|Molybdopterin| HM:PFM:REP 1086->1201|PF01568|1.5e-23|29.5|105/109|Molydop_binding| HM:PFM:REP 53->104|PF04879|4.8e-05|28.9|45/55|Molybdop_Fe4S4| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00384|IPR006656| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00384|IPR006656| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01568|IPR006657| GO:PFM GO:0030151|"GO:molybdenum ion binding"|PF01568|IPR006657| RP:SCP:NREP 2 RP:SCP:REP 2->1068|1q16A2|0.0|79.2|1066/1074|c.81.1.1| RP:SCP:REP 1077->1244|1q16A1|9e-42|82.7|168/170|b.52.2.2| HM:SCP:REP 2->1073|1q16A2|0|45.3|1071/1074|c.81.1.1|1/1|Formate dehydrogenase/DMSO reductase, domains 1-3| HM:SCP:REP 1075->1244|1q16A1|3.7e-49|31.2|170/170|b.52.2.2|1/1|ADC-like| OP:NHOMO 513 OP:NHOMOORG 304 OP:PATTERN 11-------11-------112--11111-11------------------------------------- ----1-11111----1122-21---122222-11111--22----11-1-----1-----21111-1-4----------1551-1111-----------------------------------------1--------------1-----------------------------------------11-----11111112111111111-11-11111-2------------1111111111--1111111--------1---11-1-----------------------------------------------------------------------------------1----CB------11----------1--1------1---421---1-11121111111-11111112-------1--------1--11--1-1--1----------1----------------------------------------------21--1-11111111-133332311-1122--121-11111111--1--1-1-1-----------311--11------1-------32----1111------1---------------------------11---------1---2122--11--21----1--------422122-3443332333-4333332333433233331222111-4424444445444444311112132---22222222222---1----------111-----------------------1----1111---------1---------------------------11-------------1--------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--3-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 1245 STR:RPRED 99.9 SQ:SECSTR #cHHHHGGGTGGGEEEEEcHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccTTccEEEEEEcTTccEEEEEcccTTEEEccccccTTcccHHHHTHHHHHTcTTcccccEEEcHHHHHGGGccccTTcTEEEEEEETTEEEcEEEccccTTcccEEEccHHHHHHHHHHHHHHHHHHHcGGGEEEEEccGGGTcccTTHHHHHHHHHTcccEEcGGGGTTHHHHHHHHHHHcccEEEGGcTTTccEEEEEcccccTTcHHHHHHHHHHHHHTcEEEEEcccccHHHHHccEEEcccTTcHHHHHHHHHHHHHHTTcccHHTTccHHHHHHHEEcHHHHHHHHHHHTTccHHHHHHHHcccHHHHHHHcccHHHHHHcccEEcccccGGGccTTHHHHHHHHHHHHHTcEEETTccHHTTTTcccEEEccccTTccGGHHHHHHHHHHHTTcccHHHHTTGGGccHHHHHHcTTTTTcGGGccccccccHHHHGGGHHHHHHHHccccccccccccccHHHHHHHHHHcccccccEEEEEcccGGGccccHHHHHHHHEEEEEccccTTGGGccEEEEEEEEcccGGGccccccccTcccEEEcccccccccEccccTTcccHHHHHHHHHHHTTcGGcccccHHHHHHHHTGGGTccHHHHTTccEEEccccccccTTccccccccccEEccHHHHHHTcccccccccccccTTTcHHHHHHccEEEEEccccTEcHHHHHHHTccTTcEEEEEccccEEEEEEEEcTTccTTEEEEccccccTTccccGGGTTTTHHHHcGGGGcGGGccTTcccccEEcTTccccccccHHHHHHTTccHHHHHHHccTTHHHHHHHHHHcHHHHTTccHHHHHHHHHHHHHHHGHHHHHHTcEEccGGGcccEEccEEEETTEEEEEEEccHHHHHHHHHHHHHHHHHTTcTTccccccTTccGGGGcccTTcccccHTTccccHHHHHHHHccccccTTccccccTTcccTTccTTccccTTTccccccGGGTTTTTcccccTTcHHHHHHHHHHHHHHHEETTEEccccHHHHHHHHHHHTTcHHHHHHHHHHHHHHcccTTcccccccccTHHHHHHHHEcHHHHHTTTccTTcEEEEEccccEEEEEEEEcTTccTTEEEcccccccccccTTcTTcccccccGGGcccccccccTTTccccTccccHccEEEEEEETTcEEEEEEccEEcccccccccEEccccc DISOP:02AL 1-1,1238-1247| PSIPRED cHHHHHHHHHHcccccccccccEEEEcccccHHHHHHcccccEEEEEEEcccccccccEEEEEEEccEEEEEEccccccccccccccccccccHHHHHHHHHHHcHHHccccEEEcccccccHHHHHHcccccccHHHHHccHHHccccccccccccEEEccHHHHHHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHcccccccccHHHHHcccEEEEEcccHHHHcHHHHHHHHHHHHcccEEEEEcccccHHHHHHcEEEccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccHHHHccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHcccEEEcccccccccccccccccccccccccccccHHHHcccccccEEEccccccccccccccccccccccccccEEEEEEccccEEEEEEHHHHHHHHHHcccccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHccccccccEEEEEccHHccEEcccHHHHHHHHHHHHHccccccccccccccccccccccccHHHcccHHHcccccccccccccHHHHccccHHccccHHHHccccccccccccccccHHHHHHHcccccccccccccHHHHHHHHHHccccHHHHHHHHHcccccEEEEEcccccccccccHHHHHHHHHcccccccccHHHHEccccccHHHHHHccccccccHHHHHHHHHHHccccEEEEEcccccHHHHHccEEccccccHHHccEEEcccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcHHHHHccccccccccccEEEccccccccccccccccccHHHccccccccHHHcccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHccccccccEEEHHHcccccEEEEEcccccccccccccccccccccccccccccccccEEEEEccHHHHHccccccccccccccccccccccccccccccccEEEEcccccccccccccccHHHHHHHccccEEEEcHHHHHHHccccccEEEEEcccEEEEEEEEEcccccccEEEEEcccccccccccccccccccccccEEccccccHHHHccccccEEEEcccccccccccccEEEEEEEccccccccccccHHHHHcc 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