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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF66219.1
DDBJ      :             inner membrane protein YohD
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  150/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:189 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   60->142 PF09335 * SNARE_assoc 2e-06 37.3 %
:HMM:PFM   23->144 PF09335 * SNARE_assoc 1.1e-20 28.2 117/123  
:HMM:PFM   116->176 PF04290 * DctQ 0.001 21.3 61/133  
:BLT:SWISS 1->185 YOHD_ECOLI 5e-64 63.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF66219.1 GT:GENE ACF66219.1 GT:PRODUCT inner membrane protein YohD GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 2314972..2315541 GB:FROM 2314972 GB:TO 2315541 GB:DIRECTION + GB:PRODUCT inner membrane protein YohD GB:NOTE identified by match to protein family HMM PF09335 GB:PROTEIN_ID ACF66219.1 GB:DB_XREF GI:194406000 LENGTH 189 SQ:AASEQ MDINTLITHYGYAALVIGSMAEGETVTLLGGVAAHQGLLKFPLVAAAVALGGMMGDQLLYLLGRCYGGKILRRFPRYHTKIRRAQKMIQRHPYLFVIGTRFMYGFRVVGPLLIGASRLPPKIFLPLNIVGALIWALLFTTLGYLGGEVIAPWLHDLDQHLRHGVWLILAIVLVVGVRWWLKRRGKAEAR GT:EXON 1|1-189:0| BL:SWS:NREP 1 BL:SWS:REP 1->185|YOHD_ECOLI|5e-64|63.2|185/192| TM:NTM 5 TM:REGION 1->23| TM:REGION 41->63| TM:REGION 90->112| TM:REGION 124->146| TM:REGION 159->180| SEG 43->55|lvaaavalggmmg| RP:PFM:NREP 1 RP:PFM:REP 60->142|PF09335|2e-06|37.3|83/119|SNARE_assoc| HM:PFM:NREP 2 HM:PFM:REP 23->144|PF09335|1.1e-20|28.2|117/123|SNARE_assoc| HM:PFM:REP 116->176|PF04290|0.001|21.3|61/133|DctQ| OP:NHOMO 181 OP:NHOMOORG 152 OP:PATTERN -------------------------------------------------------------------- -1-12-------------------------------1---11-----------11------------------------------111----------------------------------------------------------------------------1-------------------1------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------1--------------------------------------------11------11-111------------------------------1----------------------------------1------------------------------------------1-1--1-1------------------1-------------1-----111-111----------1112122222-112222122-212111-------------------------------------------11--1111111111111-1111111111111111111111-----111111111111111111111111---------------------------1-------------------------1-----1111121111-11-112111111111-----------1---------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------D------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,187-190| PSIPRED ccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //