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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF66249.1
DDBJ      :             aminotransferase YbdL
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  853/915 : Eukaryota  189/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:386 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->386 1u08A PDBj 0.0 85.6 %
:RPS:PDB   19->385 2douB PDBj 3e-46 22.3 %
:RPS:SCOP  5->386 1u08A  c.67.1.1 * 9e-50 85.6 %
:HMM:SCOP  6->386 1w7lA_ c.67.1.1 * 1.1e-104 33.3 %
:RPS:PFM   63->383 PF00155 * Aminotran_1_2 3e-39 36.4 %
:HMM:PFM   32->383 PF00155 * Aminotran_1_2 1.6e-62 28.7 341/363  
:BLT:SWISS 1->386 YBDL_ECOLI 0.0 85.5 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF66249.1 GT:GENE ACF66249.1 GT:PRODUCT aminotransferase YbdL GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 713321..714481 GB:FROM 713321 GB:TO 714481 GB:DIRECTION + GB:PRODUCT aminotransferase YbdL GB:NOTE identified by match to protein family HMM PF00155; match to protein family HMM PF01053 GB:PROTEIN_ID ACF66249.1 GB:DB_XREF GI:194406030 LENGTH 386 SQ:AASEQ MRNNPLIPKSKLPNLGTTIFTQMSALAQKHQAINLSQGFPDFDGPRYLHERLAYHVAQGANQYAPMTGAQALREAIADKTAEIYGYRPDDVSDITVTAGATEALYAAITALVRAGDEVICFDPSYDSYAPAVALSGGVLKRIALTPPHFRVDWQAFSALLSERTRLVILNTPHNPTATVWRQADIEALWQAIGEREIYVLSDEVYEHICFAVEGHASVLAHPQLRERAVAVSSFGKTFHMTGWKIGYCVAPAAISAEIRKVHQYLTFCVNTPAQLALADMLRAAPEHYRALPDFYRKKRDVLVNALAQSRLKVLPCEGTYFLLIDYSAVSTLNDVEFCQWLTEEVGVAAIPLSVFCAAPFPHQLIRLCFAKQESTLLAAAERLCKL GT:EXON 1|1-386:0| BL:SWS:NREP 1 BL:SWS:REP 1->386|YBDL_ECOLI|0.0|85.5|386/386| BL:PDB:NREP 1 BL:PDB:REP 5->386|1u08A|0.0|85.6|382/382| RP:PDB:NREP 1 RP:PDB:REP 19->385|2douB|3e-46|22.3|359/368| RP:PFM:NREP 1 RP:PFM:REP 63->383|PF00155|3e-39|36.4|313/341|Aminotran_1_2| HM:PFM:NREP 1 HM:PFM:REP 32->383|PF00155|1.6e-62|28.7|341/363|Aminotran_1_2| GO:PFM:NREP 3 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00155|IPR004839| GO:PFM GO:0016769|"GO:transferase activity, transferring nitrogenous groups"|PF00155|IPR004839| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00155|IPR004839| RP:SCP:NREP 1 RP:SCP:REP 5->386|1u08A|9e-50|85.6|382/382|c.67.1.1| HM:SCP:REP 6->386|1w7lA_|1.1e-104|33.3|381/0|c.67.1.1|1/1|PLP-dependent transferases| OP:NHOMO 4402 OP:NHOMOORG 1108 OP:PATTERN 22313222222222225511122553344364212442333226644445555-34344571234-22 46A3854544415355444-441155434445566658754455556423319BA645115441767575546777653237344633456434--111435346636341111111-11----1433534242354443433363544444433222223323535665613111113112123322112857888887795688887375547878677554444444466233333333333332222326232572A1428899671726944433333233455444444444442222222222222354766555547575777777747426664333336-31425554455413553444212643444411111426564554444433333333337-558559567A41855866B766686744248666668695555555565544655111111111111111111111111111112146334B8479668678566677DC66676566A7988134496688756769735534353511111114444642A842558375887-54542454555654538321222222221211111113443433422242113111322221111221112212---3544------44553564444465544-4453454343443444443464651115455455555545454632333331-455575466777--1111111433357445222223-112112224444434-136377778A8C676675665434324323522232112112121333444433412222264443322------------------------------------4333323222354 ----224-421-23323333563656533121133233333332222334233332333333223112221231211-1113242211-37232332212412344-27343636452332234C4162CH4-6462223533932332133243333421253441522344355445*5644688AQ3B354A8999 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 386 STR:RPRED 100.0 SQ:SECSTR cccTTTccTGGGTTcccccHHHHHHHHHHHHHEEcccccccccccHHHHHHHHHHHTcGGcccccHHHHHHHHHHHHHHHHHHHcccccTTTcEEEEccHHHHHHHHHHHTccTTcEEEEEccccHHHHHHHHHTTcEEEEEcccGTTccccGGGccHHHHHHEEEEEEccccTTTcccccHHHHHHHHHHHHHHTcEEEEEcTTTTcccccccccGGGGcTTGGGTEEEEEEHHHHHTcGGGccEEEEEcHHHHHHHHHHHHTTcccccHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHTTTTTcEEcccccccEEEEEccccccTccHHHHHHHHHHTTTEEcEEGGGGTccGGGTTEEEEEccccHHHHHHHHHHHHHG DISOP:02AL 1-11| PSIPRED ccccccccHHHHccccccHHHHHHHHHcccccEEcccccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccHHHEEEEccHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHcccEEEEEEEcccccEEcHHHHHHHccccccEEEEccccccccccccHHHHHHHHHHHHHccEEEEEEcccccccccccccccHHHcccccccEEEEccccHHcccccHHEEEEEccHHHHHHHHHHHHHccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccEEEEEEEccccccccHHHHHHHHHHHccEEEEccHHcccccccccEEEEEEcccHHHHHHHHHHHHHc //