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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF66347.1
DDBJ      :             transcriptional regulator, GntR family with aminotransferase domain
Swiss-Prot:             

Homologs  Archaea  44/68 : Bacteria  588/915 : Eukaryota  41/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.67.1
:444 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->66 1v4rA PDBj 8e-08 39.7 %
:BLT:PDB   95->426 1wstA PDBj 8e-27 30.0 %
:RPS:PDB   2->109 1e2xA PDBj 4e-18 18.5 %
:RPS:PDB   126->425 2douB PDBj 1e-31 14.9 %
:RPS:SCOP  2->68 1e2xA1  a.4.5.6 * 2e-18 26.9 %
:RPS:SCOP  65->444 1vp4A  c.67.1.1 * 2e-34 19.8 %
:HMM:SCOP  1->68 1v4rA1 a.4.5.6 * 8.7e-18 55.9 %
:HMM:SCOP  60->444 1wstA1 c.67.1.1 * 2.1e-75 31.2 %
:RPS:PFM   5->66 PF00392 * GntR 1e-11 56.5 %
:RPS:PFM   123->396 PF00155 * Aminotran_1_2 7e-29 34.6 %
:HMM:PFM   4->66 PF00392 * GntR 1.8e-21 49.2 63/64  
:HMM:PFM   126->411 PF00155 * Aminotran_1_2 3.4e-21 19.4 284/363  
:BLT:SWISS 1->435 MOCR_RHIME 2e-65 35.6 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF66347.1 GT:GENE ACF66347.1 GT:PRODUCT transcriptional regulator, GntR family with aminotransferase domain GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2924242..2925576) GB:FROM 2924242 GB:TO 2925576 GB:DIRECTION - GB:PRODUCT transcriptional regulator, GntR family with aminotransferase domain GB:NOTE identified by match to protein family HMM PF00155; match to protein family HMM PF00392 GB:PROTEIN_ID ACF66347.1 GB:DB_XREF GI:194406128 LENGTH 444 SQ:AASEQ MPRYQHIARQLKTAIEQGELAPGTRLPSSRTWAQELGVSRATVENAYGELVAQGWLERRGQAGTFVSNALRFETAPPIPAVFAGESPEPKPFQMGLPALDLFPREKWARVMGRRLRTQTRFDLALGDVCGEAILRQAIVDYLRVSRSIECLPEQVFITSGYADSMRLILRTLSVPGDSMWVEDPGFPLIRPVITQEGITLAPIPVDADGLNVAAGMRDCPQGRFALVTPAHQSPLGVALSLTRRRQLLAWAANVQAWIIEDDYDSEFRYHGKPLPPLKSLDAPQRVIYAGTFSKSLFPALRTAWLVVPIKQIEHFRQQASLMPCSVPLLWQHTLADFIRDGHFWRHLKKMRQHYAQRRLWIEEALAEQGFVVTLQKGGIQLVIEVEGDDKAQVAKANQAGLAVQALSRWRVVSSGKGGILLSFTNITSAGMAKQVACQLRQAIQ GT:EXON 1|1-444:0| BL:SWS:NREP 1 BL:SWS:REP 1->435|MOCR_RHIME|2e-65|35.6|433/493| BL:PDB:NREP 2 BL:PDB:REP 4->66|1v4rA|8e-08|39.7|63/100| BL:PDB:REP 95->426|1wstA|8e-27|30.0|327/403| RP:PDB:NREP 2 RP:PDB:REP 2->109|1e2xA|4e-18|18.5|108/222| RP:PDB:REP 126->425|2douB|1e-31|14.9|296/368| RP:PFM:NREP 2 RP:PFM:REP 5->66|PF00392|1e-11|56.5|62/64|GntR| RP:PFM:REP 123->396|PF00155|7e-29|34.6|272/341|Aminotran_1_2| HM:PFM:NREP 2 HM:PFM:REP 4->66|PF00392|1.8e-21|49.2|63/64|GntR| HM:PFM:REP 126->411|PF00155|3.4e-21|19.4|284/363|Aminotran_1_2| GO:PFM:NREP 6 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00392|IPR000524| GO:PFM GO:0005622|"GO:intracellular"|PF00392|IPR000524| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00392|IPR000524| GO:PFM GO:0009058|"GO:biosynthetic process"|PF00155|IPR004839| GO:PFM GO:0016769|"GO:transferase activity, transferring nitrogenous groups"|PF00155|IPR004839| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00155|IPR004839| RP:SCP:NREP 2 RP:SCP:REP 2->68|1e2xA1|2e-18|26.9|67/73|a.4.5.6| RP:SCP:REP 65->444|1vp4A|2e-34|19.8|379/420|c.67.1.1| HM:SCP:REP 1->68|1v4rA1|8.7e-18|55.9|68/0|a.4.5.6|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 60->444|1wstA1|2.1e-75|31.2|384/0|c.67.1.1|1/1|PLP-dependent transferases| OP:NHOMO 2334 OP:NHOMOORG 673 OP:PATTERN 112111322222222214211221--------------1111121-21------12122321111--- 224-A11-111-1-3------1---6------133354641212341-2111222312--344352564611---12123-42----------2-------4---915-1----------------1-11--11--21133---33-------1111-------1--112-------------33311111--67787898A49989994554588A9221A111111111J6111121111111111211132-321121---5544111--111--11111111122222212222221111111111111111111111114325777778726215441222521-1131--33-2--1--2112112----2111------1844-124112133333333237-22425634371-733463568A53311--3163-2423922222222-22--112--------------------------------2-2CA87BJGHHHLDBBB9LLKNCCCC59LDFEBFD--89735433I995B6471133463---------1232-1-11132123544-312--111-222246--2-----------------------1--423-213--1215333--12122-11-3-2---1-1-------46841762332222212-3212312212333112114999871213244434333333343A-13---1--633333133332---------------768111---1-------1776764412-2299A9DCA88BBC94446-------------411111345442422122111------1111----------------------------------------1211111111-3- --------------21---1--1-1---------------------------------1-----1-------1-----------1--1-1----1-1-11---2-2-12-2-------------2-------------------------1-------11-3-2----2-81-3-1-1-C----12--7-----51222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 444 STR:RPRED 100.0 SQ:SECSTR HcccccEEccccccccEEEEEEETTcHccccHHHHTTccHHHHHHHHHHHTTccEEEccccccccccHHHHHccccHHHHHHHHTTcccEEcccccccccccHHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHHHHcccccTTcEEEEccHHHHHHHHHHHTccTTcEEEEEccccHHHHHHHHHTTcEEEEEcccTTcccGGGccHHHHHHEEEEEEccccTTTcccccHHHHHHHHHHHHHHTcEEEEEcTTTTcccccccccGGGcTTGGGTEEEEEEHHHHHcGGGccEEEEEcHHHHHHHHHHHHTTcccccHHHHHHHHHHHTccccHHHHHHHHHHHHHHHHHHHHTTTTTcEEcccccccEEEEEccccccHHHHHHHHHTTEEcEEGGGGEEcGGGTTEEEEEccccccHHHHHHHHHHHHHHcH DISOP:02AL 73-86| PSIPRED ccHHHHHHHHHHHHHHccccccccccccHHHHHHHHcccHHHHHHHHHHHHHcccEEccccccEEEccccccccccccccccccccccccccccccccHHHccHHHHHHHHHHHHHccccHHcccccccccHHHHHHHHHHHHHHccccccHHHEEEEccHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHcccEEEEEEcccccccHHHHHHHcccccEEEEEccccccccccccHHHHHHHHHHHHHcccEEEEEcccccccccccccccHHHccccccEEEEcccHHHHHHcHHHEEEEccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccEEEEEEEccccHHHHHHHHHHcccEEEEccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHc //