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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF66620.1
DDBJ      :             radical SAM enzyme, Cfr family
Swiss-Prot:RLMN_SALTI   RecName: Full=Ribosomal RNA large subunit methyltransferase N;         EC=2.1.1.-;AltName: Full=23S rRNA m2A2503 methyltransferase;

Homologs  Archaea  1/68 : Bacteria  795/915 : Eukaryota  39/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:388 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   214->316 3cb8A PDBj 6e-05 31.9 %
:RPS:PDB   28->372 2a5hA PDBj 9e-33 11.4 %
:RPS:SCOP  129->328 1tv7A  c.1.28.3 * 2e-07 19.6 %
:HMM:SCOP  120->352 1tv8A_ c.1.28.3 * 1.4e-10 25.7 %
:RPS:PFM   128->265 PF04055 * Radical_SAM 1e-09 36.4 %
:HMM:PFM   124->293 PF04055 * Radical_SAM 1.3e-14 25.0 148/166  
:BLT:SWISS 1->388 RLMN_SALTI 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF66620.1 GT:GENE ACF66620.1 GT:PRODUCT radical SAM enzyme, Cfr family GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2715376..2716542) GB:FROM 2715376 GB:TO 2716542 GB:DIRECTION - GB:PRODUCT radical SAM enzyme, Cfr family GB:NOTE identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048 GB:PROTEIN_ID ACF66620.1 GB:DB_XREF GI:194406401 LENGTH 388 SQ:AASEQ MSEQIVTPESSTPVVLNNETKINLLDLNRQQMREFFKNLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLTNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDTIRDEIVPINKKYNIETFLGAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKETPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEVIDIKAI GT:EXON 1|1-388:0| SW:ID RLMN_SALTI SW:DE RecName: Full=Ribosomal RNA large subunit methyltransferase N; EC=2.1.1.-;AltName: Full=23S rRNA m2A2503 methyltransferase; SW:GN Name=rlmN; OrderedLocusNames=STY2770, t0331; SW:KW 4Fe-4S; Complete proteome; Cytoplasm; Iron; Iron-sulfur;Metal-binding; Methyltransferase; rRNA processing;S-adenosyl-L-methionine; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->388|RLMN_SALTI|0.0|100.0|388/388| GO:SWS:NREP 7 GO:SWS GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|4Fe-4S| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0051536|"GO:iron-sulfur cluster binding"|Iron-sulfur| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0008168|"GO:methyltransferase activity"|Methyltransferase| GO:SWS GO:0006364|"GO:rRNA processing"|rRNA processing| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| BL:PDB:NREP 1 BL:PDB:REP 214->316|3cb8A|6e-05|31.9|94/244| RP:PDB:NREP 1 RP:PDB:REP 28->372|2a5hA|9e-33|11.4|315/400| RP:PFM:NREP 1 RP:PFM:REP 128->265|PF04055|1e-09|36.4|121/164|Radical_SAM| HM:PFM:NREP 1 HM:PFM:REP 124->293|PF04055|1.3e-14|25.0|148/166|Radical_SAM| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| RP:SCP:NREP 1 RP:SCP:REP 129->328|1tv7A|2e-07|19.6|184/327|c.1.28.3| HM:SCP:REP 120->352|1tv8A_|1.4e-10|25.7|206/0|c.1.28.3|1/1|Radical SAM enzymes| OP:NHOMO 978 OP:NHOMOORG 835 OP:PATTERN -------------------------------------------------------------------1 111111111111111-111-11--1121121111111111111111111------11---1111111111111111111111121222111111111--11111111111--------------21111111111111111---11111111111111111111111111111111111111111111111112111111111111111211111111111111211111122111111111111111111111----------------------1111111111111111111111111111111111111121111111111111222222212111111111211111111111111111111111-11112111111111111111111121111111111111-1111111111111111111111111111111111111111111111111111111------------------------------111112111111111111111111111111111111111111122111111121111211121111111111122211211111111111111111111122223311111111111111111111111111111111111111111111111111111112111--1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111-111111111111111112111211111-111111111111112122221111211112111111111111111111111111111111111111211111111111111--------111------------------1---1111111111111131 1111111-1---112----------------------------------------------------------------------------------------111--A1-----------------------------------------------------------------1544Q444334366-424411115 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 348 STR:RPRED 89.7 SQ:SECSTR ###########################cHHHHHHHcTTccHHHHcEETcHHHHHHTccccHHTTccccHHHHHHHHTcTTcccHHHHTHTccTTcTTcHHHHHHcccGGGcccTTccccTTcEEEEEEcccccTTcTTTTTTTccccccHHHHHHHHHHHTHHHEEEEEEcTTccEEEEEEccTTcccHHHHHHHHHHHHTcTTccTTccEEEEEccHHHHcGGGccHHHHHHGGGccEEEEEccHHHHcTccGGGccHHHHHHHHHHHHHHHHTTccEEEEEEccTTTTccHHHHHHHHHHHHTTEEEEEEEcccccTTcGGGcccHHHHHHHHHTTcTTcccGGGccEEEEEETTTTEEEEccccEEEEEcHH############# DISOP:02AL 1-18,366-381| PSIPRED ccccccccccccccccccccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHcccHHHHHHHHHHcccccccEEEEEEcccccEEEEEEEcccEEEEEEEEEcccEEEEEEcccccccccEEEEcccccccccccHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccHHccHHHHHHHHHHHcccccccccccEEEEEccccHHHHHHHHHHccccEEEEEccccHHHHHHHccccccccHHHHHHHHHHHHHHHcccccEEEEEEEEEccccccHHHHHHHHHHHcccccEEEEEEcccccccccccccHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEc //