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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF66646.1
DDBJ      :             inner membrane protein YbiP
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  151/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.76.1
:526 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   220->482 1e2sP PDBj 1e-10 13.3 %
:RPS:SCOP  338->482 1aukA  c.76.1.2 * 4e-05 12.0 %
:HMM:SCOP  212->484 1p49A_ c.76.1.2 * 6e-13 21.7 %
:HMM:PFM   219->488 PF00884 * Sulfatase 3.3e-44 22.2 266/379  
:HMM:PFM   82->140 PF01663 * Phosphodiest 0.00086 20.3 59/364  
:BLT:SWISS 1->526 YBIP_ECOLI 0.0 81.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF66646.1 GT:GENE ACF66646.1 GT:PRODUCT inner membrane protein YbiP GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(949547..951127) GB:FROM 949547 GB:TO 951127 GB:DIRECTION - GB:PRODUCT inner membrane protein YbiP GB:NOTE identified by match to protein family HMM PF00884 GB:PROTEIN_ID ACF66646.1 GB:DB_XREF GI:194406427 LENGTH 526 SQ:AASEQ MNSTLIDSLLARRRAVSPWAGLYFLQSLLINLALGYPFSLLYTAAFTCLLLLLWRYLPRGQKALLGICSLVAACYFPFGQAYGAPNFNTLLALHSTNMEESSEILTIFPWYSYLTGLFIFALGIIALRRRKEEVRPRWNSLDSLCLLISVAAFFVAPVQNLAWGGVFKVIDTGYPVFRFAKDVIVNNNEVIEEQHRMAQLSGIKDSWTVTAVKPRYHIYVVVIGESARRDAMGAFGGHWDNTPFASHVNGDFFMDYIAASGSTQKSLGLTLNRVVDNKPQYQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEAHFLKNGDFEADKNTRDDALLTMTAQVLATERTQPQLIVLHLMGSHPQACDRTQGKYATFVQSKETSCYLYTMTQTDDLLRQLYTQLRHSGDSFSLVYFSDHGLAFKERGKAVQYLAHDDKFQQNFQVPFMVLSSDSKAHRIIKARRSANDFLSFFSQWTGISAKEIKNRYRFISEQKAGPVYITNFKLQKVDYNHLGSDIFSLK GT:EXON 1|1-526:0| BL:SWS:NREP 1 BL:SWS:REP 1->526|YBIP_ECOLI|0.0|81.4|526/527| TM:NTM 4 TM:REGION 26->48| TM:REGION 58->80| TM:REGION 106->127| TM:REGION 143->165| SEG 49->53|lllll| RP:PDB:NREP 1 RP:PDB:REP 220->482|1e2sP|1e-10|13.3|263/481| HM:PFM:NREP 2 HM:PFM:REP 219->488|PF00884|3.3e-44|22.2|266/379|Sulfatase| HM:PFM:REP 82->140|PF01663|0.00086|20.3|59/364|Phosphodiest| RP:SCP:NREP 1 RP:SCP:REP 338->482|1aukA|4e-05|12.0|142/481|c.76.1.2| HM:SCP:REP 212->484|1p49A_|6e-13|21.7|263/553|c.76.1.2|1/1|Alkaline phosphatase-like| OP:NHOMO 223 OP:NHOMOORG 152 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------1111-111----1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-11-1-1-1111-----------111--------------------------------------1----------1-1--11--111------------1----111--------1----------1--2------1-1112111---------21--------11111-1-------1----------------11--12-2333233322-3223322243322222223111--332111111112111111122121112----------------2---------------11122132212---111111-----1-11111111-1112------------------------2---------1111--------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------5---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 292 STR:RPRED 55.5 SQ:SECSTR ##################################################################################################################################################################################################HHHHH#TcEEEEEEEcccccHHHHHEEEEEccccTTccGGGTccccccHHHHHHTcEEEccEEcccccHHHHHTcccccccTTccccccTTccHHHTTTcEEEEEEcccccccGGGTTcGGGGTccEEEEcccEcccccccccccccEEETTEEEEccccHHHHHHHHHHHHHHHTTccEEEEEEccTTcccccHHHHHHHHHHHHHHHHHHHHHHTTcGGGEEEEEcccccGGGGGGccccccTTcccHHHHEEccEEEcTTTcccEEEcccEEGGGHHHHHHHHTTEEEHH####################################### DISOP:02AL 1-2,198-210,526-527| PSIPRED ccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEcccHHHcccccccccccccHHHHccEEEccEEEccccHHHHHHHHHcccccccccccccHHHHHHHcccEEEEEEccccccccccccHHHHcccccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEEccccccHHHcccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccccccccccEEEEEEEcccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccEEEcccccEEcHHHHHHHHcccc //