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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF66673.1
DDBJ      :             bacterial extracellular solute-binding protein, family 5
Swiss-Prot:             

Homologs  Archaea  12/68 : Bacteria  391/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:601 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   52->587 1xocA PDBj 1e-18 28.7 %
:RPS:PDB   56->587 3dp8B PDBj 5e-66 19.7 %
:RPS:SCOP  50->599 1vr5A1  c.94.1.1 * 2e-68 17.5 %
:HMM:SCOP  49->589 1vr5A1 c.94.1.1 * 5.8e-105 28.8 %
:RPS:PFM   97->498 PF00496 * SBP_bac_5 3e-19 30.5 %
:HMM:PFM   98->503 PF00496 * SBP_bac_5 1.8e-68 25.0 360/372  
:BLT:SWISS 1->601 YEJA_ECOLI 0.0 86.5 %
:TM

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF66673.1 GT:GENE ACF66673.1 GT:PRODUCT bacterial extracellular solute-binding protein, family 5 GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 2363806..2365611 GB:FROM 2363806 GB:TO 2365611 GB:DIRECTION + GB:PRODUCT bacterial extracellular solute-binding protein, family 5 GB:NOTE identified by match to protein family HMM PF00496 GB:PROTEIN_ID ACF66673.1 GB:DB_XREF GI:194406454 LENGTH 601 SQ:AASEQ MIARVMLLLVALVSAGAQAQEIKESYAFAVLGEPKYAFNFDHFDYVNPAAPKGGQMTLSAIGTFDNFNRYSLRGNPGVRTEALYDTLFTTSDDEPGSYYPLIADHARYAADYSWVEISINPRARFHDGTPITARDVAFTFHKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDMLSLFSLPIMPEKFWKNHKLSDPLSTPPLASGPYRITQWKMGQYIVYSRVKNYWAANLPVNRGRFNLDTIRYDYYLDDNVAFEAFKAGAFDLRLENDAKNWATRYIGKNFDNHYIIKEEQKNESAQDTRWLAFNIQRPVFKDRRVREAVTLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDADELVLLAPMKKDLPPEVFTQIYQPPVSNGDGYDRENLLKADALLTQAGWVINGQQRVNSVTGKPLTFELLLPASSNSQWVLPFQHNLQRLGITMTIRQVDNSQLTNRMRSRDYDMMPRLWRAMPWPSSDLQISWASEYIDSSYNAPGVQSPVVDKLIAQIIAAQGDKAKLVPLGRALDRVLTWNYYMLPMWYMAQDRLAWWDKFSHPAIRPVYTIGLDTWWYDVNKAAKLPAARR GT:EXON 1|1-601:0| BL:SWS:NREP 1 BL:SWS:REP 1->601|YEJA_ECOLI|0.0|86.5|601/604| TM:NTM 1 TM:REGION 1->22| BL:PDB:NREP 1 BL:PDB:REP 52->587|1xocA|1e-18|28.7|470/504| RP:PDB:NREP 1 RP:PDB:REP 56->587|3dp8B|5e-66|19.7|483/497| RP:PFM:NREP 1 RP:PFM:REP 97->498|PF00496|3e-19|30.5|344/366|SBP_bac_5| HM:PFM:NREP 1 HM:PFM:REP 98->503|PF00496|1.8e-68|25.0|360/372|SBP_bac_5| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF00496|IPR000914| GO:PFM GO:0006810|"GO:transport"|PF00496|IPR000914| RP:SCP:NREP 1 RP:SCP:REP 50->599|1vr5A1|2e-68|17.5|515/535|c.94.1.1| HM:SCP:REP 49->589|1vr5A1|5.8e-105|28.8|504/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 800 OP:NHOMOORG 406 OP:PATTERN --1-------------1----------1----11-------------12-312--11----------- ----1--1-------------1---2------1------2-1---22-1--1--------11---23-12--------------------------------------------------------------1----11------21-1---------1--------11------------1-3---1----1-22222111--12-1-1111--111---1---11111162---------------------------------------------1---------------------------------------------1-1-2221212-2--211------1-12----11-----11-114--1-11-------1--3266F3336535355565665665-22322524454-C7753435455475---2233333234-----------111-2-----------------------------------264411222212111111411111112265133112221-21131523711--1---1-------------1111-112--2111-111111111----141111-1-1111113111-211111-1---32--1-----2-----------------------11-------11221211222112222-221222122222222122211132---1111111111111111122122111-211111111111--------------2311----------1----11111-111122332333542334334441-11-11---11111111121122----------------1-111111--------3-----------------------------2---2-----1 --------------------------------------------------------------------------------------------------------------------------------------------------------------2----1------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 567 STR:RPRED 94.3 SQ:SECSTR ##################################cccccccccEEcccccccccEEEEEEccccccccTTccTTccHHHHHHHccccEEEcTcTTccEEEccEEEEEEcTTccEEEEEEccccccTTcccccHHHHHHHHHHHHTTGGTTcHHHHHEEEEEEccccEEEEEEccccTTHHHTcccccccccGGGccccccTTccccccccccEEEEEEETTTEEEEEEcTTccccGGcTTcccccccEEEEEEcccHHHHHHHHHTTcccEEEEETTcccHHHHHHHHTcTTcEEEEEEEEccccEEEEEEEcTTcTTTTcHHHHHHHHHHccHHHHHHTTTccccccccccccTTcGGGTTcGGGccHHHcTTccTTccTTccTccccTTTccccccccccHHHHHHHHHHTTccccTTccccEETTEEcEEEEEEETTcHHHHHHHHHHHHHTTTcEEEEEEEcHHHHHHHHHHTcccEEEEEcccTTTTHHHHHGGGccccHHHHHTTTcTTHHHHHHHHHHHHHccGcHHHHHHHHHHHHHHHHHTTcEEEEEEEcEEEEEEcGGGccccccccTTcHccGGGEccccccccccGGG DISOP:02AL 1-1,597-602| PSIPRED ccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccHHHHHHHHHcccEEEcccccccEEEcEEEEEEEcccccEEEEEEccccEEcccccccHHHHHHHHHHHHccccHHHHHHHccccEEEccccEEEEEEccccHHHHHHHHccccccHHHHccccccccccccccccccEEEEEEEcccEEEEEEccccccccccccccccEEEEEEEEEEccHHHHHHHHHccccEEEEcccHHHHHHHHccccccccEEEEEEEEcccccEEEEEEEcccccccccHHHHHHHHHHccHHHHHHHHHccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccEEEcccccEEEEEEEcccccHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHcccccEEEEEccccccccHHHHHHHccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccEEEEEEcccEEEEEEccccccEEccccccccHHHcccccHHHHHHHHcc //