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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF66803.1
DDBJ      :             TPR repeat-containing protein YfgC
Swiss-Prot:YFGC_SALTY   RecName: Full=TPR repeat-containing protein yfgC;Flags: Precursor;

Homologs  Archaea  0/68 : Bacteria  411/915 : Eukaryota  35/199 : Viruses  0/175   --->[See Alignment]
a.118.8
:487 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   41->265 3c37A PDBj 7e-26 34.2 %
:RPS:PDB   41->280 3c37B PDBj 2e-29 31.9 %
:RPS:PDB   307->424 3ck7D PDBj 7e-09 8.5 %
:RPS:SCOP  307->427 1ya0A1  a.118.8.1 * 2e-08 14.0 %
:HMM:SCOP  313->428 1zu2A1 a.118.8.1 * 9.4e-08 21.2 %
:RPS:PFM   67->254 PF01435 * Peptidase_M48 2e-13 37.1 %
:HMM:PFM   48->254 PF01435 * Peptidase_M48 9.2e-31 23.7 198/225  
:HMM:PFM   376->400 PF07721 * TPR_4 0.00014 32.0 25/26  
:BLT:SWISS 1->487 YFGC_SALTY 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF66803.1 GT:GENE ACF66803.1 GT:PRODUCT TPR repeat-containing protein YfgC GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 2664494..2665957 GB:FROM 2664494 GB:TO 2665957 GB:DIRECTION + GB:PRODUCT TPR repeat-containing protein YfgC GB:NOTE identified by match to protein family HMM PF01435 GB:PROTEIN_ID ACF66803.1 GB:DB_XREF GI:194406584 LENGTH 487 SQ:AASEQ MFRQLKKNLVATLIAALALGQVAPAFADPADTLPDMGTSAGSTLSIGQEMQMGDFYVRQLRGSAPLINDPLLVQYINALGMRLVSHADSVKTPFHFFLINNDEINAFAFFGGNVVLHSALFRYADNESQLASVMAHEISHVTQRHLARAMEDQKRSAPLTWVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRAGFDPQAMPSFLEKLLDQARYSTRPPEILLTHPLPESRLADARNRANQMRPVVVQSSADFYFAKARALGMYNSGRNQLTSDLLDQWSKGNVRQQHAAQYGRALQAMEASKYDEARKTLQPLLSAEPNNAWYLDLATDIDLGQKRANDAINRLKNARDLRVNPVLQLNLANAYLQGGQPKAAETILNRYTFSHKDDGNGWDLLAQAEAALNNRDQELAARAESYALAGRLDQAISLLSSASAQAKLGSQQQARYDARIDQLRQLQERFKPYTKM GT:EXON 1|1-487:0| SW:ID YFGC_SALTY SW:DE RecName: Full=TPR repeat-containing protein yfgC;Flags: Precursor; SW:GN Name=yfgC; OrderedLocusNames=STM2494; SW:KW Complete proteome; Repeat; Signal; TPR repeat. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->487|YFGC_SALTY|0.0|100.0|487/487| SEG 177->189|agmaaltgtlagt| SEG 445->465|qaisllssasaqaklgsqqqa| BL:PDB:NREP 1 BL:PDB:REP 41->265|3c37A|7e-26|34.2|196/217| RP:PDB:NREP 2 RP:PDB:REP 41->280|3c37B|2e-29|31.9|210/216| RP:PDB:REP 307->424|3ck7D|7e-09|8.5|118/498| RP:PFM:NREP 1 RP:PFM:REP 67->254|PF01435|2e-13|37.1|170/208|Peptidase_M48| HM:PFM:NREP 2 HM:PFM:REP 48->254|PF01435|9.2e-31|23.7|198/225|Peptidase_M48| HM:PFM:REP 376->400|PF07721|0.00014|32.0|25/26|TPR_4| GO:PFM:NREP 3 GO:PFM GO:0004222|"GO:metalloendopeptidase activity"|PF01435|IPR001915| GO:PFM GO:0006508|"GO:proteolysis"|PF01435|IPR001915| GO:PFM GO:0016020|"GO:membrane"|PF01435|IPR001915| RP:SCP:NREP 1 RP:SCP:REP 307->427|1ya0A1|2e-08|14.0|121/458|a.118.8.1| HM:SCP:REP 313->428|1zu2A1|9.4e-08|21.2|113/0|a.118.8.1|1/1|TPR-like| OP:NHOMO 604 OP:NHOMOORG 446 OP:PATTERN -------------------------------------------------------------------- 154--------------------------------------------------------------------------------1--11-----111---12111111111--------------1-----1---1-----------323222-1111------1-222211-------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------22-1113111111-1--111-222111111111111-11111111113-11111111111121311-----------------------12111-11111-----------------1111112-112222211111111111111111111111222211111132111111111211413211-------22222112122122121221212111111111112--2-1111----------------1-----222221221222222222222222222233---3232------11111111111111111-1111111111111111111111111111111111111111111211111111-111111111111--12-----111122322111--------1---11111112222233332212222222121---------22112222222222222111111112111--1-11------------1--------------------------------------1- ----11------222----1111------11-1--------------1--------1-----------1-11-1--------1-----------------1--1-------------------------------------------------------------1-------1-1-1-------1--111-111122- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 384 STR:RPRED 78.9 SQ:SECSTR ########################################cccccHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHTTccccccccEEEEEccccccEEEETTTEEEEEHHHHHHcccHHHHHHHHHHHHHHHHTTHHHHHHHHHcHHHHHHHHHccHHHHHHHHHHHHccccc#####HHHcTTccccHHHHHHHHHHHHHHHHHTTccTTHHHHHHHHHTc###########TccccccHHHHHHHHHHHHTcccccccccHHHHHHHHHTTccccHHHHHHHHHHHHccccHHHHHHHHHHHHTTcccEEEccTTcTTHHHHHTTcccTTcHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHcEEEEcccccccccEEEEHHHHHHHHHHHHHHcHHHHHHHHHHHHcT############################################### DISOP:02AL 1-5,7-7,232-241| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccEEEccccEEEEEHHHHHHcccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcc //