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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF66909.1
DDBJ      :             regulatory protein, LacI
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  542/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
a.35.1c.93.1
:339 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->59 2bjcA PDBj 2e-09 55.3 %
:BLT:PDB   71->320 3d8uB PDBj 7e-39 33.6 %
:RPS:PDB   12->338 1efaA PDBj 2e-49 23.1 %
:RPS:SCOP  14->59 1bdhA1  a.35.1.5 * 3e-13 41.3 %
:RPS:SCOP  72->339 1rzrA2  c.93.1.1 * 3e-48 22.4 %
:HMM:SCOP  10->71 2bjcA1 a.35.1.5 * 1.2e-17 46.8 %
:HMM:SCOP  71->340 1dbqA_ c.93.1.1 * 6e-53 26.3 %
:RPS:PFM   14->59 PF00356 * LacI 1e-09 56.5 %
:RPS:PFM   72->315 PF00532 * Peripla_BP_1 4e-25 28.4 %
:HMM:PFM   71->324 PF00532 * Peripla_BP_1 2.4e-22 21.5 251/279  
:HMM:PFM   14->59 PF00356 * LacI 5.5e-21 58.7 46/46  
:BLT:SWISS 15->318 GNTR_ECOLI 4e-45 34.6 %
:PROS 15->33|PS00356|HTH_LACI_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF66909.1 GT:GENE ACF66909.1 GT:PRODUCT regulatory protein, LacI GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 2502155..2503174 GB:FROM 2502155 GB:TO 2503174 GB:DIRECTION + GB:PRODUCT regulatory protein, LacI GB:NOTE identified by match to protein family HMM PF00356; match to protein family HMM PF00532 GB:PROTEIN_ID ACF66909.1 GB:DB_XREF GI:194406690 LENGTH 339 SQ:AASEQ MSIPRKRRSTGKVTIADVAQLAGVGTMTVSRALRTPEQVSDKLREKIEAAVHELGYMPNLAASALASASSHTIAMVVPNLAEAGCSEMFAGLQQILQPAGYQIMLAESQHRVEQEEKLLETLLASNIAAAILLSVEHSTTVRQWLKNASIPVMEMGAIRSDPIDMNIGIDNVAAMYELTEMLIQRGYQNIGLLCANQEQWIFQQHLHGWYKAMLRHHMSPNRVINAALPPNFSTGASQLPEFLLAWPELDALVCVSDELACGALYECQRRRIKVPDDLAVVGFGDSDVSRVCQPPLTTMTVPHRKIGSEAGRALLERLNQGNWSDRKSIASSLCMRESC GT:EXON 1|1-339:0| BL:SWS:NREP 1 BL:SWS:REP 15->318|GNTR_ECOLI|4e-45|34.6|301/331| PROS 15->33|PS00356|HTH_LACI_1|PDOC00366| SEG 60->70|laasalasass| SEG 122->134|llasniaaaills| BL:PDB:NREP 2 BL:PDB:REP 13->59|2bjcA|2e-09|55.3|47/62| BL:PDB:REP 71->320|3d8uB|7e-39|33.6|247/266| RP:PDB:NREP 1 RP:PDB:REP 12->338|1efaA|2e-49|23.1|325/328| RP:PFM:NREP 2 RP:PFM:REP 14->59|PF00356|1e-09|56.5|46/46|LacI| RP:PFM:REP 72->315|PF00532|4e-25|28.4|243/261|Peripla_BP_1| HM:PFM:NREP 2 HM:PFM:REP 71->324|PF00532|2.4e-22|21.5|251/279|Peripla_BP_1| HM:PFM:REP 14->59|PF00356|5.5e-21|58.7|46/46|LacI| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00356|IPR000843| GO:PFM GO:0005622|"GO:intracellular"|PF00356|IPR000843| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00356|IPR000843| RP:SCP:NREP 2 RP:SCP:REP 14->59|1bdhA1|3e-13|41.3|46/56|a.35.1.5| RP:SCP:REP 72->339|1rzrA2|3e-48|22.4|268/272|c.93.1.1| HM:SCP:REP 10->71|2bjcA1|1.2e-17|46.8|62/0|a.35.1.5|1/1|lambda repressor-like DNA-binding domains| HM:SCP:REP 71->340|1dbqA_|6e-53|26.3|270/282|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 3076 OP:NHOMOORG 546 OP:PATTERN -------------------------------------------------------------------- 6352H--1226-1--11--------4------1----3466--35HB-8442IFB--2--5443A4CAE8373225A7----2-----1111-1-----1-7-319-739--------------------------67752---8----------------------1-1-------------33-11AA-8659998987B7998868DCAA8499748B17455777654G422222222222222112445361652A113775524533775223444465642254454345554554544555455535522266657417C222222242434113445D3221115--------F1-478991-21--B663-----2-423--------22122222124---2--31237--J774JEAMLLB8658-36763332736--------422-1--1-------------------------------32212331245676542222558B5354337673433--55561411435159----1--1----------------1----1--3------------------6-----------------------------9994-77-63853435123--112133114-------------DDDB5DAA99BAB9B99-9989B899AB9A99A9AA9EIEED565BCAABBBBBB9ABA9AI888999A3-DAAA99AAAAAA---------------84B333648133333334----------4522222447122231554----------868799999A89EE7798988677-------1----------------4-------------------------5443-39433-1- -------------1------------------------------------------------------------------------------------------------------------------------------------------------1--------------1--------------------5---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 335 STR:RPRED 98.8 SQ:SECSTR ####EHHHHHHcccHHHHHHTTTccHHHHHHHHTTcccccTHHHHHHHHHHHHHTccccHHHHHHTTccccEEEEEEccTTcHHHHHHHHHHHHHHHHTTcEEEEEEccccHHHHHHHHHHHHHTTccEEEEEccccHHHHHHHHHHcccccEEEccccTTccccEEEEcHHHHHHHHHHHHHHTTcccEEEEEccTTcHHHHHHHHHHHHHHHTTTccccEEEEccccccHHHHHHHHHHHHHTTccccEEEEccHHHHHHHHHHHHTTTcccTTTcEEEEEEccGGGGGccccccEEEccHHHHHHHHHHHHHHHHTTcccccEEEEccEEEccccc DISOP:02AL 1-16,62-66| PSIPRED ccccccccccccccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHHHHcccccHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHccccEEEEccccccccccEEEEcHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHHccccccEEEEEcHHHHHHHHHHHHHcccccccEEEEEEEccHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEEccc //