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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF66984.1
DDBJ      :             major capsid protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  83/915 : Eukaryota  1/199 : Viruses  9/175   --->[See Alignment]
:334 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   30->316 PF05125 * Phage_cap_P2 5e-35 34.3 %
:HMM:PFM   29->327 PF05125 * Phage_cap_P2 2.8e-42 26.4 296/333  
:BLT:SWISS 33->328 VPN_BPHP1 2e-19 30.4 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF66984.1 GT:GENE ACF66984.1 GT:PRODUCT major capsid protein GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2560452..2561456) GB:FROM 2560452 GB:TO 2561456 GB:DIRECTION - GB:PRODUCT major capsid protein GB:PROTEIN_ID ACF66984.1 GB:DB_XREF GI:194406765 LENGTH 334 SQ:AASEQ MYAFKTERPDAARRYHNKFVTGTNYQEESNRRFALSEPTENILRTSILESGWLIKNITLRDVNAVSGNAVNIGASELHTGRVDGGRFHKKMAINGTEFFLTETDTCARISYSDMSHIYHTGVPDEFEKTVESFFAQAYALDMLRVGFNGVSIANTTNPEINKKGEDVNIGWHALAKAYGNGKQIISEPVTLGETGTWKNIDSLANHLITELIAEQFREDPRLVVLVGAELAAHQRLKLFNAADRPADVNAAQMATSSVAGRFAFIPPFMPGKRLAVTTLDNLHIYTQAITRWFRAEFDDENSEYVHSYLRNEGYALGEPELYAAVDESALTFAD GT:EXON 1|1-334:0| BL:SWS:NREP 1 BL:SWS:REP 33->328|VPN_BPHP1|2e-19|30.4|286/336| RP:PFM:NREP 1 RP:PFM:REP 30->316|PF05125|5e-35|34.3|283/331|Phage_cap_P2| HM:PFM:NREP 1 HM:PFM:REP 29->327|PF05125|2.8e-42|26.4|296/333|Phage_cap_P2| GO:PFM:NREP 1 GO:PFM GO:0019028|"GO:viral capsid"|PF05125|IPR006441| OP:NHOMO 123 OP:NHOMOORG 93 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-2----11--2----1---1-------1------1-----------12---------------------1--2------------------------------------------------2------1---1-1---1--11---------------------11-211---1-1-1-1-11-1122-11111------1--121-1---21--22212122--2--------2---3-----33---------------211-------1-----2-----11----1---3----1-------1-----------31---1-111----1-11---111--------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- 1----------------11-------1---11111-------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-7,334-335| PSIPRED ccccccccHHHHHHHHHHHHHHHccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccEEcccEEEEEEEcccccccEEEccccccEEcccccccEEEEEEEcccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHEEccccEEccccccHHHcccHHHHHHHHHHHHHHHcccccEEEEEEEEccccccccHHHHHHHHHHccccHHHHccccEEEEEcHHHccHHHHHHcccccccHHHHHHHHHHHHccccccEEcccccccEEEEEEccccEEEEEcccEEEEEEEccccHHHHHHHHcccccccccHHHEEEEEcccccccc //