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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF67168.1
DDBJ      :             leucine-rich repeat protein
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  67/915 : Eukaryota  86/199 : Viruses  0/175   --->[See Alignment]
b.30.5c.10.2
:731 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   126->708 3g06A PDBj e-121 46.2 %
:RPS:PDB   185->383 1dceA PDBj 3e-14 16.2 %
:RPS:PDB   442->718 3ckdA PDBj 2e-38 44.3 %
:RPS:SCOP  122->415 1g9uA  c.10.2.6 * 2e-21 30.7 %
:RPS:SCOP  584->701 1jovA  b.30.5.7 * 9e-06 20.8 %
:HMM:SCOP  152->407 1jl5A_ c.10.2.6 * 2.1e-36 35.1 %
:RPS:PFM   5->99 PF06767 * Sif 2e-07 31.6 %
:RPS:PFM   115->147 PF12468 * TTSSLRR 1e-04 51.5 %
:RPS:PFM   153->256 PF02630 * SCO1-SenC 4e-04 23.8 %
:RPS:PFM   251->329 PF05076 * SUFU 5e-04 35.4 %
:HMM:PFM   111->147 PF12468 * TTSSLRR 3.8e-13 45.9 37/46  
:HMM:PFM   704->726 PF09467 * Yopt 8.5e-05 60.9 23/71  
:HMM:PFM   7->99 PF06767 * Sif 0.00027 24.7 93/337  
:BLT:SWISS 122->718 IPA7_SHIFL 8e-99 42.0 %
:REPEAT 5|167->202|209->244|251->286|293->328|356->385
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67168.1 GT:GENE ACF67168.1 GT:PRODUCT leucine-rich repeat protein GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 915282..917477 GB:FROM 915282 GB:TO 917477 GB:DIRECTION + GB:PRODUCT leucine-rich repeat protein GB:PROTEIN_ID ACF67168.1 GB:DB_XREF GI:194406949 LENGTH 731 SQ:AASEQ MPLKEEIWNKISAFFSSEHQVEAQNCIAYLCHPPETASPEEIKSKFECLRMLAFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTTIPACIPEQITTLILDNNELKSLPENLQGNIKTLYANSNQLTSIPATLPDTIQEMELSINRITELPERLPSALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTALPETLPPGLKTLEAGENALTSLPASLPPELQVLDVSKNQITVLPETLPPTITTLDVSRNALTNLPENLPAALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFSERTIQNMQRLMSSVDYQGPRVLFAMGDFSIVRVTRPLHQAVQGWLTNLEEEDVNQWRAFETEVNAAAFSMFLDRLSDTQNTRHPDFKEQVSAWLMRLAEDSALRETAFIIAMGATISCEDRVTLAYHQMQEATLVHDAERGAFDSHLAELIMAGREIFRLEQIESLAREKVKRLFFIDEVEVFLGFQNQLRESLSLTTMTQDMRFYNVSGITESDLDEAEIRIKIAENRDFHKWFALWGPWHKVLERIAPEEWREMMAKRAECIETDEYQSRVNAELEALGIAGDPDAERMAGMRIMEEINQTLFTEIMENILLKKEVSSLMSAYW GT:EXON 1|1-731:0| BL:SWS:NREP 1 BL:SWS:REP 122->718|IPA7_SHIFL|8e-99|42.0|524/565| NREPEAT 1 REPEAT 5|167->202|209->244|251->286|293->328|356->385| SEG 336->349|tvlpetlpptittl| BL:PDB:NREP 1 BL:PDB:REP 126->708|3g06A|e-121|46.2|560/601| RP:PDB:NREP 2 RP:PDB:REP 185->383|1dceA|3e-14|16.2|198/566| RP:PDB:REP 442->718|3ckdA|2e-38|44.3|253/257| RP:PFM:NREP 4 RP:PFM:REP 5->99|PF06767|2e-07|31.6|95/312|Sif| RP:PFM:REP 115->147|PF12468|1e-04|51.5|33/46|TTSSLRR| RP:PFM:REP 153->256|PF02630|4e-04|23.8|101/164|SCO1-SenC| RP:PFM:REP 251->329|PF05076|5e-04|35.4|79/167|SUFU| HM:PFM:NREP 3 HM:PFM:REP 111->147|PF12468|3.8e-13|45.9|37/46|TTSSLRR| HM:PFM:REP 704->726|PF09467|8.5e-05|60.9|23/71|Yopt| HM:PFM:REP 7->99|PF06767|0.00027|24.7|93/337|Sif| RP:SCP:NREP 2 RP:SCP:REP 122->415|1g9uA|2e-21|30.7|290/353|c.10.2.6| RP:SCP:REP 584->701|1jovA|9e-06|20.8|101/269|b.30.5.7| HM:SCP:REP 152->407|1jl5A_|2.1e-36|35.1|239/0|c.10.2.6|1/1|L domain-like| OP:NHOMO 1135 OP:NHOMOORG 155 OP:PATTERN --------------------------------------------------12---------------- ----1-----------------------------------------------------------------------------------------11----------2---------------------------------------3-12-----------------1131--------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------1--------------------------------3---------------------------------------11---------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------1------------------3-----------------2-------1-----1--------29--3123222131-2-A9BA489--145545422234---------------1-------------------------1-------1-21--1-2-------------------------1----------------------11A8--------2---------------------------------------- ----211-------1---------------------------------------------------------1--1---------11--11------------1---I2-*EB9BF86646484QD4C2MsC4GDD5667B59G968546C22E6I89I798375113334343----1*----2---5-21---4-33 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 593 STR:RPRED 81.1 SQ:SECSTR #########################################################################################################################HHHHHHHHHHHTccGGGHHHHHHHHHHHHHcEEETTTEEEccccEEcTTGGGGGGccccccccTTccEEEEEcccTTcccccccHHHHHHHHHHHHHHHHHHcTTcHHHHHHHHHHHHHHcTGGGHHHHHHHHHHHHHHcGGGHHHHHHHHHHHHHHHHTTccEEEcTTccccccccGGGGTTccEEccccccccccGGGGGTccEEEccccccccGGGTTcccccEEEccccccccccTGcTcTccEEEcTTcGGGGcccccTTTTTTcTTccEEEcccccccETTTTTcTTccHcTTccccEEEccccccc####cccHHHHHHTTccTTTccTTcTTGGGTTcTTHHHHHHHHHHHHTccccHTccHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccTTHHHHHHHHHHHHHHHHHHHTTTTTcHHHHHHHHHHHHHHHHHHHHHHHHHTTcccccHHHHHHHHHHTTTTTTTcccccHHHHHHHcTTccHHHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHH############# DISOP:02AL 1-2,5-5,94-119,546-548| PSIPRED ccHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccHHHHHHHHccccccccEEEEcccccEEEEEEEEcccccEEcccccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccccccEEEcccccccccccHHcccccEEEccccccccccHHHcccccEEEccccccccccHHHHccccEEEccccccccccHHHcccccEEEccccccccccHHHHccccEEEccccccccccccccccccEEEccccccccccHHHcccccEEEccccccccccHHHcccccEEEccccccccccHHHcccccEEEcccccccccccHHcccccEEEcccccccccccHHHHHHcccccccEEEccccccccccHHHHHHHHHHHccccccccccccccccccHHHHHHHHcccccccccHHHHHHHHHHHccccccHHHHHccHHHccHHcccHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //