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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF67217.1
DDBJ      :             inner membrane protein YfiN
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  633/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
d.58.29
:379 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   217->370 1w25A PDBj 1e-15 35.7 %
:RPS:PDB   165->371 3btaA PDBj 3e-33 4.9 %
:RPS:SCOP  225->372 1w25A3  d.58.29.2 * 2e-26 33.8 %
:HMM:SCOP  225->378 1w25A3 d.58.29.2 * 7.3e-41 41.2 %
:RPS:PFM   222->370 PF00990 * GGDEF 8e-26 48.6 %
:HMM:PFM   220->374 PF00990 * GGDEF 1.4e-44 41.6 154/161  
:HMM:PFM   136->203 PF00672 * HAMP 1.2e-06 25.4 67/70  
:BLT:SWISS 1->376 YFIN_ECOLI e-154 71.8 %
:TM

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67217.1 GT:GENE ACF67217.1 GT:PRODUCT inner membrane protein YfiN GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 2821774..2822913 GB:FROM 2821774 GB:TO 2822913 GB:DIRECTION + GB:PRODUCT inner membrane protein YfiN GB:NOTE identified by match to protein family HMM PF00672; match to protein family HMM PF00990; match to protein family HMM TIGR00254 GB:PROTEIN_ID ACF67217.1 GB:DB_XREF GI:194406998 LENGTH 379 SQ:AASEQ MTLIWLLICVASVLTLKQYAQKNLDLTAATMAHSLEAALVFSDNAAAAETLATLGRQGQFSAAEVRDKNGRTIASWRYDARAADDKLIGLISHWLFPLPVSQPVWHNGRAIGEVRLVARDSLIGHFIWLSLAVLTGCILLASGIALLLTRYLHNGVVDALQNITEVVHDVRTNRNFSRRVPDERIAEFHLFAQDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSCINALMKDNSARSSSALLFLDGDNFKYINDTWGHAAGDRVLIEIAKRLAEFGGSRYQTYRLGGDEFAMVLYDVHSEYEVQRICAALSQAFNRPFELHNGQRITMTLSIGFALTWEHATAEKLQELADRNMYQAKHRRAERSLN GT:EXON 1|1-379:0| BL:SWS:NREP 1 BL:SWS:REP 1->376|YFIN_ECOLI|e-154|71.8|376/408| TM:NTM 3 TM:REGION 1->23| TM:REGION 87->109| TM:REGION 129->151| BL:PDB:NREP 1 BL:PDB:REP 217->370|1w25A|1e-15|35.7|154/454| RP:PDB:NREP 1 RP:PDB:REP 165->371|3btaA|3e-33|4.9|203/1277| RP:PFM:NREP 1 RP:PFM:REP 222->370|PF00990|8e-26|48.6|146/160|GGDEF| HM:PFM:NREP 2 HM:PFM:REP 220->374|PF00990|1.4e-44|41.6|154/161|GGDEF| HM:PFM:REP 136->203|PF00672|1.2e-06|25.4|67/70|HAMP| RP:SCP:NREP 1 RP:SCP:REP 225->372|1w25A3|2e-26|33.8|148/162|d.58.29.2| HM:SCP:REP 225->378|1w25A3|7.3e-41|41.2|153/0|d.58.29.2|1/1|Nucleotide cyclase| OP:NHOMO 7269 OP:NHOMOORG 641 OP:PATTERN -------------------------------------------------------------------- C3349---111---16311-1F22-111111-A6666F75998QX-------335-----B83-B4E5653---------B1578B13--------------------1----------------11-1-111-117AA66---74bJSDEF123BB---2--6C9-CCH3------------M4B3168-381888886782888888-22222888343B1FE3323339A11111111111111111111-112--1----2211---11-11-----------------------------------------------4A76E33343348382C333222737--58957CAD945338321342--A366992-----26TOO86EULIOP3588378788I-TQLOO8MN9T41KPPNTTOUUYHFKE8D92919C88774--------BDD3-X9N11111111111111111111111-11111-97CA497542ECDDEDA7776BBQa777735HLM9KDM-2ONGUGVIKN12k95PKTQJVYSI-------56FKgi2EK9AFKK5ZMJGK-EBEXDH9VL332363549565----------------JCCOD32YRHYaPkMhQdkfgifghXddeVcZVTUpk---BRBd------BGEA3K6BBBABAAACA-9CACB69ABAAAABCBBBABECCF--17377677777677775B7654367--C34444433444---N-2-2-EHGFF9hFf---------------8788837---EUOOONUUUTWRSOOQOOV-----2---WFMMIQQQPOQVQhgGIGGHGFCCG-111--X28855CC--------5-8-------------------------5433457555-1- ----1---------------------------------------------------------------------------------------------------------------------------------------------------------2----3---------72----------1--7-----7---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 209 STR:RPRED 55.1 SQ:SECSTR ####################################################################################################################################################################ccEEEEEEETTEEEEEEEcccccGGGccccccccccccccccccTTTTccHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHccccccTTccTTcccccGGGEEEEEcTTccEEEEEccEEEEEccccTTccEEEccccccccTTTccccccEEEEccccEEcEEccccGTEEGGTcTTcccccEEccHHHHHHHHHHHHHHHHTTc###### DISOP:02AL 375-380| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHccccHHHHHHHHHHHHccccEEEEEEEcccccEEEEEEccccccccHHHHHHHHHHccccccccEEEccEEEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccHHccccHHHHHHHHHHHHHHHHHcccccEEEEEccEEEEEEEcccccHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHcccccEEc //