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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF67239.1
DDBJ      :             transcriptional regulator HilD
Swiss-Prot:HILD_SALTY   RecName: Full=Transcriptional regulator hilD;

Homologs  Archaea  0/68 : Bacteria  117/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.24.16a.4.1
:309 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   225->303 2k9sA PDBj 1e-04 30.4 %
:RPS:PDB   209->305 1bl0A PDBj 1e-18 22.7 %
:RPS:SCOP  197->303 1v4aA1  a.24.16.4 * 2e-16 12.1 %
:HMM:SCOP  257->305 1d5yA2 a.4.1.8 * 9.8e-12 36.7 %
:HMM:PFM   215->253 PF00165 * HTH_AraC 3.3e-08 23.1 39/42  
:HMM:PFM   270->304 PF00165 * HTH_AraC 1.6e-10 41.2 34/42  
:BLT:SWISS 1->309 HILD_SALTY e-170 99.7 %
:PROS 258->300|PS00041|HTH_ARAC_FAMILY_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67239.1 GT:GENE ACF67239.1 GT:PRODUCT transcriptional regulator HilD GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 2992350..2993279 GB:FROM 2992350 GB:TO 2993279 GB:DIRECTION + GB:PRODUCT transcriptional regulator HilD GB:NOTE identified by match to protein family HMM PF00165 GB:PROTEIN_ID ACF67239.1 GB:DB_XREF GI:194407020 LENGTH 309 SQ:AASEQ MENVTFVSNSHQRPAADNLQKLKSLLTNTRQQIKSQTQQVTIKNLYVSSFTLVCFRSGKLTISNNHDTIYCDEPGMLVLKKEQVVNVTLEEVNGHMDFDILEIPTQRLGALYALIPNEQQTKMAVPTEKAQKIIYTPDFPARREVFEHLKTAFSCTKDTSKGCSNCNNKSCIENEELIPYFLLFLLTAFLRLPESYEIILSSAQITLKERVYNIISSSPSRQWKLTDVADHIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCGYDSTSYFIQCFKKYFKTTPSTFIKMANH GT:EXON 1|1-309:0| SW:ID HILD_SALTY SW:DE RecName: Full=Transcriptional regulator hilD; SW:GN Name=hilD; OrderedLocusNames=STM2875; SW:KW Complete proteome; DNA-binding; Transcription;Transcription regulation. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->309|HILD_SALTY|e-170|99.7|309/309| GO:SWS:NREP 3 GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation| PROS 258->300|PS00041|HTH_ARAC_FAMILY_1|PDOC00040| SEG 181->192|fllflltaflrl| BL:PDB:NREP 1 BL:PDB:REP 225->303|2k9sA|1e-04|30.4|79/107| RP:PDB:NREP 1 RP:PDB:REP 209->305|1bl0A|1e-18|22.7|97/116| HM:PFM:NREP 2 HM:PFM:REP 215->253|PF00165|3.3e-08|23.1|39/42|HTH_AraC| HM:PFM:REP 270->304|PF00165|1.6e-10|41.2|34/42|HTH_AraC| RP:SCP:NREP 1 RP:SCP:REP 197->303|1v4aA1|2e-16|12.1|107/151|a.24.16.4| HM:SCP:REP 257->305|1d5yA2|9.8e-12|36.7|49/0|a.4.1.8|1/1|Homeodomain-like| OP:NHOMO 386 OP:NHOMOORG 117 OP:PATTERN -------------------------------------------------------------------- ---------------------1---------------1----------------------------------------------------11---------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------1--11---------------1------------------------------------------------------------------------------1------------------------------1--------------1---------------------------1-----------------------------11---2------1111---1-1--1----1----------------12--7775757596-8586655557867457854---1---1556665655455646515537568--111111111111---------------2-1---------------1122111------------11-------------------31-2222214223------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 106 STR:RPRED 34.3 SQ:SECSTR #######################################################################################################################################################################################################ccHHHHHHHHHHHHHHHTTTTcccccHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHTTcccHHHHHHHHHHHHcccHHHHHT#### DISOP:02AL 1-2,24-39,197-202,306-310| PSIPRED cccEEEEcccccccHHHHHHHHHHHHcccEEEEEEccccEEEccEEEccEEEEEEEccEEEEEEccEEEEEEcccEEEEEcccEEEEEEEEccccccEEEEEEcHHHHHHHHHHHccccHHHHHccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHcc //