[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF67311.1
DDBJ      :             lipopolysaccharide biosynthesis protein WzxC
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  202/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:510 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   34->271 PF01943 * Polysacc_synt 3e-06 26.9 %
:RPS:PFM   256->322 PF09709 * Cas_Csd1 2e-04 37.5 %
:HMM:PFM   28->294 PF01943 * Polysacc_synt 4.2e-60 25.6 266/273  
:BLT:SWISS 19->510 WZXC_ECOLI 0.0 83.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67311.1 GT:GENE ACF67311.1 GT:PRODUCT lipopolysaccharide biosynthesis protein WzxC GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2231580..2233112) GB:FROM 2231580 GB:TO 2233112 GB:DIRECTION - GB:PRODUCT lipopolysaccharide biosynthesis protein WzxC GB:NOTE identified by match to protein family HMM PF01943 GB:PROTEIN_ID ACF67311.1 GB:DB_XREF GI:194407092 LENGTH 510 SQ:AASEQ MLNLAAPMTPCEQVLEKRMSLRQKTISGAKWSAIATIVIIGLGLIQMTVLARIIDNHQFGLLTVSLVIIALADTISDFGIANSIIQRKTIGHLELTTLYWLNVGLGIVVFAVVFWLSDAIAHVLHNPDLAPLIKTLSLAFIVIPHGQQFRALMQKELEFNKIGMIETTSVLAGFTFTVISAHYWPLALTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVSTNLRFGAWLTADSIVNYINTNLSTLVLARILGASVAGGYNLAYNVAVVPPAKLNPIITRVLFPAFAKIQDDTEKLRVNFYKLLSVVGIINFPALLGLMVVANNFVPLVFGEKWNSIIPILQLLCVVGLLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAILIGGHLAGAIGVTLGFLVVQIINTILSYFVMIKPVLGSSYRQYILSLWLPFYLSLPTFITSYGAGKLADGYLPLSGVFALQVMVGILSFILMIIFSRNALVMEIKNQLVGSAKMKKLLRVG GT:EXON 1|1-510:0| BL:SWS:NREP 1 BL:SWS:REP 19->510|WZXC_ECOLI|0.0|83.3|492/492| TM:NTM 12 TM:REGION 30->52| TM:REGION 56->78| TM:REGION 101->123| TM:REGION 128->150| TM:REGION 187->209| TM:REGION 242->264| TM:REGION 308->330| TM:REGION 346->368| TM:REGION 379->401| TM:REGION 405->427| TM:REGION 429->451| TM:REGION 464->486| SEG 386->400|ipailigghlagaig| RP:PFM:NREP 2 RP:PFM:REP 34->271|PF01943|3e-06|26.9|238/274|Polysacc_synt| RP:PFM:REP 256->322|PF09709|2e-04|37.5|64/578|Cas_Csd1| HM:PFM:NREP 1 HM:PFM:REP 28->294|PF01943|4.2e-60|25.6|266/273|Polysacc_synt| GO:PFM:NREP 2 GO:PFM GO:0000271|"GO:polysaccharide biosynthetic process"|PF01943|IPR002797| GO:PFM GO:0016020|"GO:membrane"|PF01943|IPR002797| OP:NHOMO 282 OP:NHOMOORG 208 OP:PATTERN ------------------------1---------1---------1-----1-------11-------- ----1---11-----------1----------1----1----121-1-111-11----------1-----------------------5461-5-----2-1-----2-1------------------------1--1111---1-2-23--------------1-423---------------1--------1---------1-------1111-1----------------------------------------------------------11--------------------------------------------------1------------------1-1------------------------1-----1-------2131--1---2--11-11-111--------2211-233131122312--21--1-22331-----------11---31------------------------------1-11----------------------------12---------12-----11--1111--1---------112111-------------------3-1--1--1-111------------------------1-----311--3----------11-1--2--1----1---------11---111111111111-11111111211112212211-------1-11111111111111111-222-1---------------------------------------------------------1------------------------------------1------111111111111----------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,11-24| PSIPRED cccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccc //