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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF67324.1
DDBJ      :             inner membrane transport protein YdiM
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  81/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:403 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   64->198 2d33D PDBj 2e-05 5.9 %
:RPS:SCOP  35->178 1pv6A  f.38.1.2 * 3e-07 20.4 %
:HMM:SCOP  1->395 1pv7A_ f.38.1.2 * 1.1e-47 23.0 %
:RPS:PFM   1->340 PF05977 * DUF894 6e-09 24.8 %
:HMM:PFM   12->352 PF07690 * MFS_1 1e-34 23.3 335/353  
:BLT:SWISS 1->402 YDIM_ECOLI e-175 79.3 %
:PROS 62->79|PS00216|SUGAR_TRANSPORT_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67324.1 GT:GENE ACF67324.1 GT:PRODUCT inner membrane transport protein YdiM GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(1448144..1449355) GB:FROM 1448144 GB:TO 1449355 GB:DIRECTION - GB:PRODUCT inner membrane transport protein YdiM GB:NOTE identified by match to protein family HMM PF07690 GB:PROTEIN_ID ACF67324.1 GB:DB_XREF GI:194407105 LENGTH 403 SQ:AASEQ MKNRYFPTAVGLYFNYFVHGMGVILMSLNMSSLEQQWHTSAAGVSIVISSLGIGRLSVLLIAGMLSDRFGRRPFIILGTACYLIFFIGILYAQTIFVAYACGFLAGMANSFLDAGTYPSLMEAFPRSPSTANILIKAFVSGGQFLLPIIISLLVWANMWFGWSFLLAGAIMLINALFLLRCPFPPYPGRILKPKISQAPVTGVHHCSLIDLISYTLYGYISMATFYLISQWLAQYGQFVAGMSYTQSIKLLSIYTCGSLLCVFITAPLVRKTIRSTTLLMFYTFISFIALLTVCLHPQAYVVMIFAFVIGFSSAGGVVQIGLTLMAARFPQEKGKATGIYYSAGSIATFTIPLITARISEMSIAHIMWFDTGIAAAGFLLALFIGYRSRAESQHHAVAASTAQ GT:EXON 1|1-403:0| BL:SWS:NREP 1 BL:SWS:REP 1->402|YDIM_ECOLI|e-175|79.3|401/404| PROS 62->79|PS00216|SUGAR_TRANSPORT_1|PDOC00190| TM:NTM 9 TM:REGION 8->30| TM:REGION 42->64| TM:REGION 81->103| TM:REGION 132->154| TM:REGION 162->184| TM:REGION 248->269| TM:REGION 276->298| TM:REGION 305->327| TM:REGION 356->378| SEG 372->385|giaaagfllalfig| RP:PDB:NREP 1 RP:PDB:REP 64->198|2d33D|2e-05|5.9|135/499| RP:PFM:NREP 1 RP:PFM:REP 1->340|PF05977|6e-09|24.8|330/402|DUF894| HM:PFM:NREP 1 HM:PFM:REP 12->352|PF07690|1e-34|23.3|335/353|MFS_1| RP:SCP:NREP 1 RP:SCP:REP 35->178|1pv6A|3e-07|20.4|142/417|f.38.1.2| HM:SCP:REP 1->395|1pv7A_|1.1e-47|23.0|391/417|f.38.1.2|1/1|MFS general substrate transporter| OP:NHOMO 173 OP:NHOMOORG 82 OP:PATTERN --------------------------------------------------------------1----- -------------------------------------------------------------------------------1-1---------------------------------------------------------------------------------------------------------------1-------------------31----------222222-------------------------111-1-1-33--1--2--11----------------------------------------------2--------------1-111-----------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--------------------------------------------------------------------------------12----3333333333-3333333333333223222212-----2-2-2222222-2--2-2233321----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 248 STR:RPRED 61.5 SQ:SECSTR ##############################################THHHHHHHHHHHHHHHHTTcccccTTccccccHHHHHHHHHHHHHcccHHHHTTccEETTEEccccccccccGGGccccEEEEccccTTccHHHHHHHHcccEEEEEEEEccTTcTTcccHHHHHHHHHHHHHHHHcccccccHHHHHHTHH#ccccccTHHHHTTTTTcccccHHHHHHHHHHHHHHHHccccccccTTccHHHHHHHHHHHHHHHHHcTTGGGcccccccTTTTTTTTHHHHHHHHH############################################################################################################ DISOP:02AL 1-3,185-203,391-404| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //