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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF67355.1
DDBJ      :             AAA superfamily ATPase with N- receiver domain
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  555/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.142.1a.185.1c.1.26c.37.1c.54.1
:880 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   110->302 3dzdA PDBj 2e-18 33.9 %
:RPS:PDB   132->351 3e2tA PDBj 1e-20 9.5 %
:RPS:PDB   519->635 3ct6B PDBj 5e-15 11.2 %
:RPS:SCOP  37->267 1lt7A  c.1.26.1 * 1e-24 7.4 %
:RPS:SCOP  269->397 1n81A  a.185.1.1 * 4e-05 5.4 %
:RPS:SCOP  523->634 3cr3C1  c.54.1.2 * 5e-12 11.7 %
:RPS:SCOP  770->867 1h99A1  a.142.1.1 * 1e-12 21.6 %
:HMM:SCOP  72->323 1ny5A2 c.37.1.20 * 2.2e-40 31.7 %
:HMM:SCOP  519->646 1pdoA_ c.54.1.1 * 2.1e-13 22.2 %
:HMM:SCOP  734->877 1h99A1 a.142.1.1 * 3.4e-13 27.3 %
:RPS:PFM   130->230 PF00158 * Sigma54_activat 2e-20 49.0 %
:RPS:PFM   523->633 PF03610 * EIIA-man 7e-05 30.9 %
:RPS:PFM   784->867 PF00874 * PRD 6e-04 30.1 %
:HMM:PFM   73->239 PF00158 * Sigma54_activat 8.1e-47 43.6 156/168  
:HMM:PFM   786->871 PF00874 * PRD 5.9e-16 24.7 85/90  
:HMM:PFM   521->632 PF03610 * EIIA-man 9.1e-07 19.1 110/116  
:HMM:PFM   3->23 PF01022 * HTH_5 0.00078 38.1 21/47  
:BLT:SWISS 3->841 LEVR_BACSU e-104 31.8 %
:PROS 177->186|PS00690|DEAH_ATP_HELICASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67355.1 GT:GENE ACF67355.1 GT:PRODUCT AAA superfamily ATPase with N- receiver domain GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 677847..680489 GB:FROM 677847 GB:TO 680489 GB:DIRECTION + GB:PRODUCT AAA superfamily ATPase with N- receiver domain GB:NOTE identified by match to protein family HMM PF00158; match to protein family HMM PF00874; match to protein family HMM PF07728 GB:PROTEIN_ID ACF67355.1 GB:DB_XREF GI:194407136 LENGTH 880 SQ:AASEQ MAIADSLRQKRSIISHHLNNLHREQRVVKVNSRPVLFLPVEALRRHHRLAVRQGDYASIQALCAERQDSLELLIGAQGSLQESLRQCKAAISYPGAGLPLLLRGPTGTGKSFLARQLWQYAIEQGILPPEAPFTVFNCAEYANNPELLTSKLFGHAKGAFTGADRAVSGLIETSNGGVLFIDEVHRLPPEGQEKLFHFMDNGTWRRLGESSDERSATVRLIFASTEDLEKHFLATFIRRIPVIVKILPIAERGQYERLAFIHHFFRREAQRLHHDLSLDSEIISQLMQETLEGNVGGLENLIRNICASAWTFGQRDDGVLEVKAGQLPDRLLMEVPFTVPQTAERIMIYREGGVFPRVSGQHQEYLRLTENICGLCEELAQENISARTFDKLVYQNLTLYLDALMNKESPRARQDKRLRFIEDVGKAIAAHYDLELNAEFAYLTGRYLTSLPLTPVEASPSVRHVMLRWLEEAPGLAQRVAQKLLDVVNNKYDLLIDTLDRLVVAAIVSNAIDATSGGKVKALIIAHGYSTASSIAGVANRLIGEKIYHAMDMPMEVAFSDVSRAIVDYLQHTDTRAGVMVLIDMGYTKEIADALLSVIHGPLVVVDNVTTRLALNVASEIALQKNIEQIAEEIVPLNQSRWDVFWPAQKKARALLVTCITGIGTAFKFKNLMEKSQLTDFDINIIACEYTRLKNSRMAASLLNQYEVIAVVGTIDPQLAGVPWVGIEELLGEQGYAHLSQLLSGYLNDKQIALINKNMVREFSLHNVVNSLTILNANKTIGHIETIIAEWQSTLGFSFNNNLIISLYVHLSCMIERLVMRNEITHYKNMTEFNERHGEFIAMVNHSFQRLKILYNVALPVAEIGYIHDIFELRIEDFHW GT:EXON 1|1-880:0| BL:SWS:NREP 1 BL:SWS:REP 3->841|LEVR_BACSU|e-104|31.8|815/935| PROS 177->186|PS00690|DEAH_ATP_HELICASE|PDOC00039| SEG 94->109|pgaglplllrgptgtg| BL:PDB:NREP 1 BL:PDB:REP 110->302|3dzdA|2e-18|33.9|183/366| RP:PDB:NREP 2 RP:PDB:REP 132->351|3e2tA|1e-20|9.5|211/307| RP:PDB:REP 519->635|3ct6B|5e-15|11.2|116/128| RP:PFM:NREP 3 RP:PFM:REP 130->230|PF00158|2e-20|49.0|98/168|Sigma54_activat| RP:PFM:REP 523->633|PF03610|7e-05|30.9|110/117|EIIA-man| RP:PFM:REP 784->867|PF00874|6e-04|30.1|83/90|PRD| HM:PFM:NREP 4 HM:PFM:REP 73->239|PF00158|8.1e-47|43.6|156/168|Sigma54_activat| HM:PFM:REP 786->871|PF00874|5.9e-16|24.7|85/90|PRD| HM:PFM:REP 521->632|PF03610|9.1e-07|19.1|110/116|EIIA-man| HM:PFM:REP 3->23|PF01022|0.00078|38.1|21/47|HTH_5| GO:PFM:NREP 7 GO:PFM GO:0005524|"GO:ATP binding"|PF00158|IPR002078| GO:PFM GO:0005622|"GO:intracellular"|PF00158|IPR002078| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00158|IPR002078| GO:PFM GO:0008134|"GO:transcription factor binding"|PF00158|IPR002078| GO:PFM GO:0009401|"GO:phosphoenolpyruvate-dependent sugar phosphotransferase system"|PF03610|IPR004701| GO:PFM GO:0016021|"GO:integral to membrane"|PF03610|IPR004701| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00874|IPR011608| RP:SCP:NREP 4 RP:SCP:REP 37->267|1lt7A|1e-24|7.4|215/305|c.1.26.1| RP:SCP:REP 269->397|1n81A|4e-05|5.4|129/186|a.185.1.1| RP:SCP:REP 523->634|3cr3C1|5e-12|11.7|111/121|c.54.1.2| RP:SCP:REP 770->867|1h99A1|1e-12|21.6|97/115|a.142.1.1| HM:SCP:REP 72->323|1ny5A2|2.2e-40|31.7|240/247|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 519->646|1pdoA_|2.1e-13|22.2|126/129|c.54.1.1|1/1|IIA domain of mannose transporter, IIA-Man| HM:SCP:REP 734->877|1h99A1|3.4e-13|27.3|110/115|a.142.1.1|1/1|PTS-regulatory domain, PRD| OP:NHOMO 4763 OP:NHOMOORG 560 OP:PATTERN -------------------------------------------------------------------- 7LM-----------------------------------------------------------------------------1--53965888926221--336346I4B55-111111---1111133363346454-------------------------------------------------------2117777778747767777733327782461311323333K---------------------6---12-----22------2---------------------------------------------------GH2ICBBDCBD6C6-J445112-5---9--2-XU6FA92B83979-12-9BE2221-1-11848993438855911111111112-86767675353-6554565555568D3221-23235111--------8331267D------------------------------3767425427IJKIJHD9999FFHHABAA78JJJEKHD-1BDCBD6658C7B9666B996776-------332FJIBXmKKJcTDYNXYc5TaVXSRdHHWWXaoyIS-111-111111111111111121--BBA88AA8G9BA59AAAA9EDGCBDCAECDHH--19EAI------A69B954BAABBABBBB-ACBACBBBAAA9CBBBBBB9A999765CBBBACDDCDC9E9BC887698993-555555555555---2-----232282L7I1111-1-----1--13343326121N9HHHHGLIHHIMIGBNJI---------57BCACCCDCDFEED55977775562222--C11122221111111142--------------------------13-11-----472 -1------------------------------------------------------------------------------------------------------------------------------------------------------------2-----------3--1--------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 403 STR:RPRED 45.8 SQ:SECSTR #####################################################################ccccGG####GHHHHHHHHHHHHTTccccEEEEEccTTccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccTTcccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHTHHHHHHHHcccTTccccHHHHHHHHHHHHccEEEEcccEEcHHHHHHHHHTcccccTTcTTccccccHHHHHTHHHHTcHHHHHHHHHHHHHTTccHHHHHHHHHHHHTcEEEETTEEEEccHHHHEEEEETcHHHHHHHTcccccEEEcccHHHHTTccccccccccTTcccTT###############################################################################################################################################################ccEEEEEEEccHHHHHHHHHHHHTTccccEEEEEEccTTccccccHHHHHHHHHHcccccEEEEEEccGGGHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHHTccHHHHHHHHH##################################################################################################################################################################################################################################################### DISOP:02AL 50-72,332-353| PSIPRED ccHHHHHcccHHHHHHHHHHHccccEEEEEcccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHHHcccccccccEEEEEcccccccHHHHHHHHHccccccccccccccccHHHHccccEEEEEEHHcccHHHHHHHHHHHHccEEEEccccccEEEEEEEEEEcccccHHHHHHHHHHHHHcHHEEEcccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccccccccHHHccHHHHHHccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccEEEEEEcccHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHccccHHHHHHHHHHccccEEEEEccccccccEEEEEEcccHHHHHHHHHHHHHHccccccEEEEEEcHHHHHHHHHHHHHHHHccEEEEEEcccccccccccEEHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHEEEEcHHHHHHHHHHHHHHHHHHHcEEEcccEEEEEEEHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccc //