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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF67511.1
DDBJ      :             cytochrome D ubiquinol oxidase subunit 1
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  612/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:514 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   7->503 PF01654 * Bac_Ubq_Cox e-129 61.8 %
:HMM:PFM   7->502 PF01654 * Bac_Ubq_Cox 4.5e-184 56.2 429/436  
:BLT:SWISS 1->504 APPC_ECOLI 0.0 84.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67511.1 GT:GENE ACF67511.1 GT:PRODUCT cytochrome D ubiquinol oxidase subunit 1 GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 1938201..1939745 GB:FROM 1938201 GB:TO 1939745 GB:DIRECTION + GB:PRODUCT cytochrome D ubiquinol oxidase subunit 1 GB:NOTE identified by match to protein family HMM PF01654 GB:PROTEIN_ID ACF67511.1 GB:DB_XREF GI:194407292 LENGTH 514 SQ:AASEQ MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAVMETIYVVTGKTVYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSLYSNYVGDIFGAPLAMEALLAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNISALWILNANGWMQYPTGAHFNIDTLRMEMSSFSDLVFNPVSQVKFVHTVMSGYVTGAMFIMSISAWYLLRGREREVALRSFAIGSVFGTLAILGTLQLGDSSAYEVAQIQPVKLAAMEGEWQTEPAPAPFHLIAWPQQEQERNAFAVKIPALLGILATHSLDTPVPGLKNLMDDALPRLKRGREAWLLMKEIAQGNRSPQVLNAFHAVEGDLGYGILLAKYAPDMNHVTPEQYRAAQRGAIPQVAPVFWSFRIMVGCGSLLLVVMLIALIQTLRIRIDQHRWVLRMTLWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTWYAHSALTPGQLAFSMGLILGLYTLFLIAEVYLMQKYARLGPSAMQHQQQAQQQG GT:EXON 1|1-514:0| BL:SWS:NREP 1 BL:SWS:REP 1->504|APPC_ECOLI|0.0|84.5|504/514| TM:NTM 7 TM:REGION 20->42| TM:REGION 93->115| TM:REGION 185->207| TM:REGION 216->238| TM:REGION 386->408| TM:REGION 423->445| TM:REGION 472->494| SEG 94->107|aplameallaffle| SEG 505->513|qhqqqaqqq| RP:PFM:NREP 1 RP:PFM:REP 7->503|PF01654|e-129|61.8|432/432|Bac_Ubq_Cox| HM:PFM:NREP 1 HM:PFM:REP 7->502|PF01654|4.5e-184|56.2|429/436|Bac_Ubq_Cox| GO:PFM:NREP 3 GO:PFM GO:0016020|"GO:membrane"|PF01654|IPR002585| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01654|IPR002585| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01654|IPR002585| OP:NHOMO 964 OP:NHOMOORG 625 OP:PATTERN -------------------------421-1--------------------11-----1---111---- 11111-11111--111111-11--1211111-11112111111111111111111-11--11111121112--------111-11-111111-111----11-1-1-1-111111111111111111-11-11-11--------2-1111---1111-------11141---------------1------12233333333233333312222233312111111111112-111111111111111111111-1-22-11-1111122-1-1111111111---------------------------------------1----------------------------2--1-11-1----11--------111111-----122111-11113111111111111-33234133211-3111-111111131-1-11111111--2222222221111-31------------11111111111111-1---12-1333233332333222255533333124542222-1112-1---11111-11--2-211----------12--1211111121111121211111122221113111-111111--1--------111-11221311211121222211221221121211--1-11-------23122322222222222-2222222222222222222332223233333333333333232222222221-211111111111---12222122221111311111111111111122222121112111212222112112111211112121-111133333122112234344434-------------------------------------------------------------11 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------1-------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 501-515| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEccccEEEEEEEcccHHHHHHccccccccccHHHccHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccccccc //