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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF68055.1
DDBJ      :             probable pyridine nucleotide-disulfide oxidoreductase YkgC
Swiss-Prot:             

Homologs  Archaea  57/68 : Bacteria  864/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
c.3.1d.166.1d.87.1
:441 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   40->435 1lpfA PDBj 8e-51 32.9 %
:RPS:PDB   1->436 1dncA PDBj 1e-60 24.9 %
:RPS:SCOP  28->111 2auaA1  d.166.1.6 * 4e-08 11.0 %
:RPS:SCOP  114->302 1gv4A1  c.3.1.5 * 3e-21 10.2 %
:RPS:SCOP  278->323 1xdiA1  c.3.1.5 * 4e-07 34.8 %
:RPS:SCOP  324->436 1aogA3  d.87.1.1 * 5e-26 23.0 %
:HMM:SCOP  1->301 1d5tA1 c.3.1.3 * 6e-51 33.7 %
:HMM:SCOP  325->437 1onfA3 d.87.1.1 * 3.5e-29 38.1 %
:RPS:PFM   28->297 PF07992 * Pyr_redox_2 1e-20 34.4 %
:RPS:PFM   328->433 PF02852 * Pyr_redox_dim 5e-14 35.8 %
:HMM:PFM   6->296 PF07992 * Pyr_redox_2 2.1e-43 40.0 195/202  
:HMM:PFM   328->434 PF02852 * Pyr_redox_dim 2.4e-29 36.4 107/110  
:BLT:SWISS 1->441 YKGC_ECOLI e-168 69.6 %
:PROS 40->50|PS00076|PYRIDINE_REDOX_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF68055.1 GT:GENE ACF68055.1 GT:PRODUCT probable pyridine nucleotide-disulfide oxidoreductase YkgC GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 668758..670083 GB:FROM 668758 GB:TO 670083 GB:DIRECTION + GB:PRODUCT probable pyridine nucleotide-disulfide oxidoreductase YkgC GB:NOTE identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF07992 GB:PROTEIN_ID ACF68055.1 GB:DB_XREF GI:194407836 LENGTH 441 SQ:AASEQ MTQYQALIIGFGKAGKTLAATLAKTGWRVAIIEQSASMFGGTCINIGCIPTKTLVHDAEREGDFSVAMQRKAAVVNFLRDKNFHNLADLDNVDVIEGRAEFIDNHTLRVFQADGERVLRGEKIFINTGAESVIPAITGLTTTAGVFDSTGLLSLSQRPARLGILGGGYIGLEFASMFANFGTKVTIFEAAPQFLPREDRDIAQAITRILQEKGVELILNANVQAVSSKEGAVQVETPEGAHLVDALLVASGRKPATAGLQLQNAGVAVNERGGIIVDDYLRTTADNIWAMGDVTGGLQFTYISLDDFRIVRDGLLGDGKRSTRDRQNVPYSVFMTPPLSRVGLTEEQARASGATVQVVTLPVAAIPRARVMNDTRGVLKAVVDVNTQRIVGVSLLCVDSHEMINIVKTVMDADLPYTVLRDQIFTHPTMSESLNDLFSLIK GT:EXON 1|1-441:0| BL:SWS:NREP 1 BL:SWS:REP 1->441|YKGC_ECOLI|e-168|69.6|441/441| PROS 40->50|PS00076|PYRIDINE_REDOX_1|PDOC00073| SEG 12->26|gkagktlaatlaktg| SEG 161->171|lgilgggyigl| BL:PDB:NREP 1 BL:PDB:REP 40->435|1lpfA|8e-51|32.9|392/472| RP:PDB:NREP 1 RP:PDB:REP 1->436|1dncA|1e-60|24.9|430/460| RP:PFM:NREP 2 RP:PFM:REP 28->297|PF07992|1e-20|34.4|250/275|Pyr_redox_2| RP:PFM:REP 328->433|PF02852|5e-14|35.8|106/110|Pyr_redox_dim| HM:PFM:NREP 2 HM:PFM:REP 6->296|PF07992|2.1e-43|40.0|195/202|Pyr_redox_2| HM:PFM:REP 328->434|PF02852|2.4e-29|36.4|107/110|Pyr_redox_dim| GO:PFM:NREP 5 GO:PFM GO:0005737|"GO:cytoplasm"|PF02852|IPR004099| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02852|IPR004099| GO:PFM GO:0045454|"GO:cell redox homeostasis"|PF02852|IPR004099| GO:PFM GO:0050660|"GO:FAD binding"|PF02852|IPR004099| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02852|IPR004099| RP:SCP:NREP 4 RP:SCP:REP 28->111|2auaA1|4e-08|11.0|82/192|d.166.1.6| RP:SCP:REP 114->302|1gv4A1|3e-21|10.2|187/224|c.3.1.5| RP:SCP:REP 278->323|1xdiA1|4e-07|34.8|46/227|c.3.1.5| RP:SCP:REP 324->436|1aogA3|5e-26|23.0|113/130|d.87.1.1| HM:SCP:REP 1->301|1d5tA1|6e-51|33.7|294/0|c.3.1.3|1/1|FAD/NAD(P)-binding domain| HM:SCP:REP 325->437|1onfA3|3.5e-29|38.1|113/119|d.87.1.1|1/1|FAD/NAD-linked reductases, dimerisation (C-terminal) domain| OP:NHOMO 3855 OP:NHOMOORG 1115 OP:PATTERN 221-115355565666233131124112-351122-1-111-12212111332211-1--13331--- 4444744444533394544-6611865555535444378635455545455256944333449464555321222222--113231114441-3221222222734323211111111111111313123221222333121113234434441233222223222454742222222222223224411115344444444344544445335344524244765444445523333333333333338564425176132229A442425676244453333334543333323333322222222222224444444443224--3333333231-333--1132--12-11131-51233124442112215533433333456343343343344444444445-4453654767434555658666773A55555444445653333333353324543223222222211222222222222222221535724545767776864444663555553556636473245533356435452366311123333333346353222512432343222-324244421333344-2111-------------------112674547754534622222242422322323331-1764511111143335335445555554-4554455444454344444444333334444454444364445444333353145555555555511331111144542575522222222222222243334235544356675555455564433434444343345554444443433433433423322222231443333--------1-211211-1-22111222121122---2112311121541 3311225-A45-2222222122323222222222212222222221333334432223222222222222222233323322222222-53222222222222425-3737272436413345289181Fg4-85A1212823653352252353554568D24321533735654664*44455655A2848A87668 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 438 STR:RPRED 99.3 SQ:SECSTR cEEccEEEEcccHHHHHHHHHHHHTTccEEEEEcccccTTHHHHHTcHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHTTcEEEEcccEEccccccEEEccETTEEEEccEEEEcccEEEccccTTTcTTGGGcccHHHHTTccccccEEEEEcccHHHHHHHHHHHHTTcEEEEEcccccccTTccHHHHHHHHHHHHHTTcEEETTEEEEEEEEccccEEEEEEEccTTccEEEEcccEEEccTTccGGGGTccccTTccccccTTcccccTTEEEccGGGcccccHHHHHHHHHHHHHHHHcccTTcccccccccEEEcccccEEEEEccHHHHHHHHGGEEEEEEEEccGGGGGccccccEEEEEEEETTTTEEEEEEEEcTTHHHHHHHHHHHHHTTccHHHHHTccccccccGGGGGccHH### DISOP:02AL 1-1| PSIPRED cccEEEEEEcccHHHHHHHHHHHHcccEEEEEEccccEEEEEEEEEccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHcccEEEEEEEEEccccEEEEEEccccEEEEEEEEEEEccccccccccccccccccEEcHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHcccEEEEEEccccccccccHHHHHHHHHHHHHcccEEEEccEEEEEEEcccEEEEEEcccEEEEEEEEEEEcccccccccccHHcccEEcccccEEEccEEEcccccEEEEEcccccccccHHHHHHHHHHHHHHHcccccccccccccEEEEEccccEEEEEccHHHHHHccccEEEEEEEcccccccEEcccccEEEEEEEEcccccEEEEEEEcccHHHHHHHHHHHHHccccHHHHHccccccccHHHHHHHHHHHcc //