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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF68487.1
DDBJ      :             putative regulatory protein
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  512/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.124.1d.58.5
:265 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   1->58 1biaA PDBj 6e-04 15.4 %
:RPS:PDB   47->260 3dlxB PDBj 3e-26 12.6 %
:RPS:SCOP  1->43 1h3dA2  d.58.5.3 * 4e-05 9.3 %
:RPS:SCOP  82->261 1t5oA  c.124.1.5 * 9e-25 12.1 %
:HMM:SCOP  79->241 1lk5A1 c.124.1.4 * 4e-27 27.3 %
:RPS:PFM   83->237 PF00455 * DeoR 6e-28 41.3 %
:HMM:PFM   83->237 PF00455 * DeoR 1e-52 39.4 155/157  
:HMM:PFM   10->67 PF08220 * HTH_DeoR 1.3e-22 38.6 57/57  
:BLT:SWISS 3->258 SGCR_ECOLI e-135 89.8 %
:PROS 10->44|PS00894|HTH_DEOR_1

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF68487.1 GT:GENE ACF68487.1 GT:PRODUCT putative regulatory protein GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 1754646..1755443 GB:FROM 1754646 GB:TO 1755443 GB:DIRECTION + GB:PRODUCT putative regulatory protein GB:NOTE identified by match to protein family HMM PF00455; match to protein family HMM PF08220 GB:PROTEIN_ID ACF68487.1 GB:DB_XREF GI:194408268 LENGTH 265 SQ:AASEQ MLMSQQRPDRIKQMLHYLWQHRHLSTQQAIELFGYAEATVRRDFHYIASRYPGMVRGHGCIDFDDSTEDKEYVFDVKRTLQSEAKREIAALARTFIKDGDCFFLDSGSTCLELAKCLVDAKVKVICNDIKIANELGGFPHVESYIIGGLIRPGYFSVGESLALEMINAFAVERAFISCDALSIETGITNATMFEVGVKTRIIQRSREVILMADHSKFDTVEPHAVATLSCITTILSDSALPSAIARRYQQAGCRLIMPDPSSGAR GT:EXON 1|1-265:0| BL:SWS:NREP 1 BL:SWS:REP 3->258|SGCR_ECOLI|e-135|89.8|256/260| PROS 10->44|PS00894|HTH_DEOR_1|PDOC00696| RP:PDB:NREP 2 RP:PDB:REP 1->58|1biaA|6e-04|15.4|52/292| RP:PDB:REP 47->260|3dlxB|3e-26|12.6|214/465| RP:PFM:NREP 1 RP:PFM:REP 83->237|PF00455|6e-28|41.3|155/157|DeoR| HM:PFM:NREP 2 HM:PFM:REP 83->237|PF00455|1e-52|39.4|155/157|DeoR| HM:PFM:REP 10->67|PF08220|1.3e-22|38.6|57/57|HTH_DeoR| RP:SCP:NREP 2 RP:SCP:REP 1->43|1h3dA2|4e-05|9.3|43/68|d.58.5.3| RP:SCP:REP 82->261|1t5oA|9e-25|12.1|174/340|c.124.1.5| HM:SCP:REP 79->241|1lk5A1|4e-27|27.3|143/150|c.124.1.4|1/1|NagB/RpiA/CoA transferase-like| OP:NHOMO 1812 OP:NHOMOORG 518 OP:PATTERN ------------------------2--1---------------------------------------- 32--72----1111-------1---5-------11112221--14-1-122-4321-3--21325245323-------2------------1--------12--14-6-4--------------------------22211----------------------------1-------------31---11-31433333334243333365442434411113216666666A2222222222222224322321-147--22144--771411--2423333333322444444444444444444444444432221333451165332334333312--144222-1-2-21----1--1--42225221--12--------1-112---1311133333333334---1--2-117--7554444A86552----2214234311111111112111---2-------------------------------1---111113334332222244562222123251122--1211-1111-1112-------311-11111--------1---12--1---1-------11-----1-----------------------------435---11-1221111--11111--1-1---------------7565562A98CABCBAA-9BAA9AAA9B9CA9AABA5A8A56432C9DCDCDCCBCCBCCC9877BBA83-666666556666---------------125333736123225765----------1-22122432211121234----------322422222321441111111----------3-------------------------1-1------2--------2---11111--- -------------1------------------------------------------------------------------------------------------------------------------------------------------------1----1------4---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 260 STR:RPRED 98.1 SQ:SECSTR ccccHHcccEEEEcTTccEEEEEEETTTTEEEEEETTEEEEEEcGGTTcccGGGccccGGGccEEEEcccccccccccccccHHHHHHHHHHGGGccTTEEEEEcTTHHHHHGGGccTTccEEEEETTTEEEEcccccGGccTTcccccEEEEEEEccHHHHHHHHHTTcccEEEEcccEEETTccEEcTcccccTTHHHHTccTTcEEEEEGEEcEEccccccccccccccEEEcccEEEEEETTTEHTcccccEEEEE##### DISOP:02AL 1-10,261-266| PSIPRED ccccccHHHHHHHHHHHHHHcccEEHHHHHHHHcccHHHHHHHHHHHHHHccEEEEEccEEEEccccccccccHHHHHHccHHHHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHccccEEEEEccHHHHHHHHHccccEEEEEccEEEccccEEEcHHHHHHHHHccccEEEEEccccccccccccccHHHHHHHHHHHHHcccEEEEEccccccccEEEEEEEHHHccEEEccccccHHHHHHHHHcccEEEEEccccccc //