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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF68527.1
DDBJ      :             tetratricopeptide repeat protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  309/915 : Eukaryota  85/199 : Viruses  1/175   --->[See Alignment]
a.118.18b.76.2
:722 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   447->551 1mufA PDBj 1e-04 30.1 %
:BLT:PDB   583->695 1ouvA PDBj 1e-11 29.2 %
:RPS:PDB   399->473 3ec5A PDBj 2e-05 18.1 %
:RPS:PDB   562->717 3e4bC PDBj 2e-30 22.6 %
:RPS:SCOP  196->309 1h3iA1  b.76.2.1 * 6e-07 13.9 %
:RPS:SCOP  402->529 1h3iA1  b.76.2.1 * 8e-12 13.4 %
:RPS:SCOP  583->714 1klxA  a.118.18.1 * 3e-15 23.0 %
:HMM:SCOP  216->352 1h3iA1 b.76.2.1 * 4.2e-18 29.2 %
:HMM:SCOP  423->547 1h3iA1 b.76.2.1 * 5.7e-20 28.5 %
:HMM:SCOP  570->715 1ouvA_ a.118.18.1 * 1.2e-30 39.0 %
:RPS:PFM   415->499 PF03268 * DUF267 2e-04 34.1 %
:RPS:PFM   473->541 PF09318 * DUF1975 1e-04 36.8 %
:RPS:PFM   636->670 PF08238 * Sel1 9e-05 48.6 %
:HMM:PFM   211->228 PF07661 * MORN_2 1.8e-05 44.4 18/22  
:HMM:PFM   259->277 PF07661 * MORN_2 0.00037 42.1 19/22  
:HMM:PFM   283->304 PF07661 * MORN_2 8.4e-05 40.9 22/22  
:HMM:PFM   307->326 PF07661 * MORN_2 2.4e-05 45.0 20/22  
:HMM:PFM   332->352 PF07661 * MORN_2 0.00093 33.3 21/22  
:HMM:PFM   357->377 PF07661 * MORN_2 6e-07 52.4 21/22  
:HMM:PFM   404->425 PF07661 * MORN_2 0.00037 40.9 22/22  
:HMM:PFM   428->449 PF07661 * MORN_2 0.0001 45.5 22/22  
:HMM:PFM   452->473 PF07661 * MORN_2 0.00027 40.9 22/22  
:HMM:PFM   569->599 PF08238 * Sel1 1.7e-06 38.7 31/39  
:HMM:PFM   602->634 PF08238 * Sel1 3.2e-05 45.5 33/39  
:HMM:PFM   636->671 PF08238 * Sel1 2.4e-09 41.7 36/39  
:HMM:PFM   672->706 PF08238 * Sel1 1.4e-08 51.4 35/39  
:HMM:PFM   471->549 PF09318 * DUF1975 3.6e-05 20.3 79/203  
:BLT:SWISS 360->474 YWQK_BACSU 2e-08 30.6 %
:BLT:SWISS 535->695 YBEQ_ECOLI 2e-18 35.4 %
:REPEAT 3|214->336|337->433|434->527
:REPEAT 2|566->632|634->704
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF68527.1 GT:GENE ACF68527.1 GT:PRODUCT tetratricopeptide repeat protein GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 2134065..2136233 GB:FROM 2134065 GB:TO 2136233 GB:DIRECTION + GB:PRODUCT tetratricopeptide repeat protein GB:NOTE identified by match to protein family HMM PF07661; match to protein family HMM PF08238 GB:PROTEIN_ID ACF68527.1 GB:DB_XREF GI:194408308 LENGTH 722 SQ:AASEQ MKKIFITIIVSLYCANICAKQSPSTESKPVNFIAQIENIDFNKTAISSDLKLLLADRYYFKDKTPCNTNTLSARAESMGLTTEEYINKIRSLRPAILDDRYFYLTVDQCDAGGTPMLTGIELCTEALCGAEYMKRSSDLWLDDELQPTVKRQATTVVHMPLPYDKEKKLWKVTGWYLESSEETGEVMQSKQIAFEGYTNEENFANRQRVSVFKSFYESGNLKSIYHYNAQNKRDGKAETYFDEKDKIAETLTFKDGQPEGEYIVYHENGAVESKRYFAQGKIKDGECPHFYDNGVLKQKHSYLNQKLEGPAFEYFPDGKIKGKYSYSKGTIVGTSTEYYSTGKIRGVYHRNNQGENDGTFEQYSEEGKLLSKATYKNGKQLSAQSWYENGHPKEESSFDSEGRKHGAVKEWFSNGKPASSKMYKHDVLDGDFEKWYENGHRESVYPYKNGMLNGDAKHWNEQGKLTYTTEYKDDKKQGADRRWSERTGKLVEEVMFANDERNGLKREFNDRTGKVLSALPYVDGDKEGTEEAYDEDGIKYIRCYHNDEELSELYAPTDVTNKAKQGDSTAQYHLGKYEFECTNYDAAMKWLTQSAEQNHPGALLFLAYAYNDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRNGDGVEKDLNKAKLHLTAAVKGGVKPALAALKELTPQTK GT:EXON 1|1-722:0| BL:SWS:NREP 2 BL:SWS:REP 360->474|YWQK_BACSU|2e-08|30.6|111/154| BL:SWS:REP 535->695|YBEQ_ECOLI|2e-18|35.4|161/325| NREPEAT 2 REPEAT 3|214->336|337->433|434->527| REPEAT 2|566->632|634->704| SEG 318->329|gkikgkysyskg| BL:PDB:NREP 2 BL:PDB:REP 447->551|1mufA|1e-04|30.1|103/251| BL:PDB:REP 583->695|1ouvA|1e-11|29.2|113/265| RP:PDB:NREP 2 RP:PDB:REP 399->473|3ec5A|2e-05|18.1|72/316| RP:PDB:REP 562->717|3e4bC|2e-30|22.6|155/405| RP:PFM:NREP 3 RP:PFM:REP 415->499|PF03268|2e-04|34.1|82/353|DUF267| RP:PFM:REP 473->541|PF09318|1e-04|36.8|68/200|DUF1975| RP:PFM:REP 636->670|PF08238|9e-05|48.6|35/36|Sel1| HM:PFM:NREP 14 HM:PFM:REP 211->228|PF07661|1.8e-05|44.4|18/22|MORN_2| HM:PFM:REP 259->277|PF07661|0.00037|42.1|19/22|MORN_2| HM:PFM:REP 283->304|PF07661|8.4e-05|40.9|22/22|MORN_2| HM:PFM:REP 307->326|PF07661|2.4e-05|45.0|20/22|MORN_2| HM:PFM:REP 332->352|PF07661|0.00093|33.3|21/22|MORN_2| HM:PFM:REP 357->377|PF07661|6e-07|52.4|21/22|MORN_2| HM:PFM:REP 404->425|PF07661|0.00037|40.9|22/22|MORN_2| HM:PFM:REP 428->449|PF07661|0.0001|45.5|22/22|MORN_2| HM:PFM:REP 452->473|PF07661|0.00027|40.9|22/22|MORN_2| HM:PFM:REP 569->599|PF08238|1.7e-06|38.7|31/39|Sel1| HM:PFM:REP 602->634|PF08238|3.2e-05|45.5|33/39|Sel1| HM:PFM:REP 636->671|PF08238|2.4e-09|41.7|36/39|Sel1| HM:PFM:REP 672->706|PF08238|1.4e-08|51.4|35/39|Sel1| HM:PFM:REP 471->549|PF09318|3.6e-05|20.3|79/203|DUF1975| RP:SCP:NREP 3 RP:SCP:REP 196->309|1h3iA1|6e-07|13.9|112/142|b.76.2.1| RP:SCP:REP 402->529|1h3iA1|8e-12|13.4|127/142|b.76.2.1| RP:SCP:REP 583->714|1klxA|3e-15|23.0|126/133|a.118.18.1| HM:SCP:REP 216->352|1h3iA1|4.2e-18|29.2|130/142|b.76.2.1|1/3|Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain| HM:SCP:REP 423->547|1h3iA1|5.7e-20|28.5|123/142|b.76.2.1|3/3|Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain| HM:SCP:REP 570->715|1ouvA_|1.2e-30|39.0|146/0|a.118.18.1|1/1|HCP-like| OP:NHOMO 891 OP:NHOMOORG 395 OP:PATTERN -------------------------------------------------------------------- -11------------------------------------------------------------------------------1--2---1111-1--Q---2----23-----------------82121-1112--------------------------------------------------------3------------------------------2---------1------------------------------------------------------------------------------------------------1111-111-1--11------------3-2-1------------G2--1---------1-3332322221111121221112-2212111-215-5---111-1-3-12122---1-11---11111111-----21---------------------------------1-A-----1112111----111111111-112111---1111----1--1----11--1--22221232131---2-12---21211--341--241--------332---1-----3436445442---322111--121-13155751--3334431-4-1--121-1-----------1-2223212-2--12422-12-21-2-12--3-------13-413-4334313113-1113332---11111111111----1111143442-2-1----11-3-32131221512-2241--2112112-1-1----------------211------1-211---------------18---11----------1-------------------------------------213 ----111-----333---------------------------------------------------------------------1----11---1-1-1--1-956153k211111-1111-1112-1-151-111-11-1-111-1---11-1111122-1111--112311241--Q8111--41-4-22--4534o --------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---- STR:NPRED 319 STR:RPRED 44.2 SQ:SECSTR ##############################################################################################################################################################################################################################################################################################################################################################################################################ETTTEEEEEEccccTTccEEEEEEETTEEEEEEEccccccEEEEEc#cEcTTccEEEEEEcTTccEEEEEEEcTTTEEEEEEEEEcTTccEEEEEc##cTTcccEEEEEEEcTTccEEEEEEEETTEEEEccTTTccTTTHHHHccccHHHHTcGGGccccccHHTTTcTHHHHHHHHHHcGGccHHHHHHHHHHHHHTTcHHHHHHHHHHHHHcccccccHHHHHHHHHTTTTTTcHHHHHHHHHHHHHTccccccHHHHHHHHHHHHHTTcTTTTHHHHHHHHTcTTccccHHHHHHHHHHHGGGccHHHHHHHHHHcHH## DISOP:02AL 1-2,19-26,722-723| PSIPRED ccHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccccccEEccHHHHHHEEEEEEEcccccccccHHHHHHHHccccHHHHHHHHHHHHHHHccccEEEEEEEEEccccccccccHHHHHHHHHHHHHHccccEEEEEccccccccccccEEEEccccccccccEEEEEEEEEcccccccEEEEccEEcccccEEEEEEEccEEccEEEEEEccccEEEEEEEcccccEEEEEEEEEccccEEEEEEEEEccEEccEEEEEEccccEEEEEEEEcccccccEEEEEcccccEEEEEEEEccEEcccEEEEEccccEEEEEEEEccEEEccEEEEEccccEEEEEEEccccccEEEEEEEcccccEEEEEEEccccEEEEEEEcccccEEEEEEEEccccccEEEEEEcccccEEEEEHHcccccccEEEEEcccccEEEEEEEEccEEccEEEEEcccccEEEEEEEcccEEEEEEEEEEcccccEEEcHHHHHHHHcHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcc //