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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF68856.1
DDBJ      :             transcriptional regulator, LysR family
Swiss-Prot:YEIE_ECOLI   RecName: Full=Uncharacterized HTH-type transcriptional regulator yeiE;

Homologs  Archaea  9/68 : Bacteria  644/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.94.1
:287 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   86->286 2fyiC PDBj 3e-13 26.3 %
:RPS:PDB   1->106 3bj6A PDBj 2e-08 7.5 %
:RPS:PDB   85->286 1al3A PDBj 6e-26 19.9 %
:RPS:SCOP  1->102 1b9mA1  a.4.5.8 * 1e-10 11.8 %
:RPS:SCOP  89->283 1i69A  c.94.1.1 * 2e-33 18.0 %
:HMM:SCOP  1->110 1b9mA1 a.4.5.8 * 2.4e-22 37.4 %
:HMM:SCOP  80->289 1uthA_ c.94.1.1 * 7.9e-48 32.4 %
:RPS:PFM   89->283 PF03466 * LysR_substrate 4e-30 36.9 %
:HMM:PFM   86->286 PF03466 * LysR_substrate 2e-54 34.3 201/209  
:HMM:PFM   5->64 PF00126 * HTH_1 1.1e-18 48.3 60/60  
:BLT:SWISS 1->287 YEIE_ECOLI e-141 92.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF68856.1 GT:GENE ACF68856.1 GT:PRODUCT transcriptional regulator, LysR family GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2348136..2348999) GB:FROM 2348136 GB:TO 2348999 GB:DIRECTION - GB:PRODUCT transcriptional regulator, LysR family GB:NOTE identified by match to protein family HMM PF00126; match to protein family HMM PF03466 GB:PROTEIN_ID ACF68856.1 GB:DB_XREF GI:194408637 LENGTH 287 SQ:AASEQ MHITLRQLEVFAEVLKSGSTTQASVMLSLSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRVYASSTIGNYILPAMIARYRQHYPALPLELSVGNSQDVINAVLDFRVDIGLIEGPCHSTEIISEPWLEDELVVFAAPSSPLTQGPVTLEQLAASPWILRERGSGTREIVDYLLLSHLPRFHMAMELGNSEAIKHAVRHGLGISCLSRRVIAEQLQAGTLGEVAVPLPRLVRTLWRVHHRQKHLSNALQRFLSYCE GT:EXON 1|1-287:0| SW:ID YEIE_ECOLI SW:DE RecName: Full=Uncharacterized HTH-type transcriptional regulator yeiE; SW:GN Name=yeiE; OrderedLocusNames=b2157, JW2144; SW:KW Complete proteome; DNA-binding; Transcription;Transcription regulation. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->287|YEIE_ECOLI|e-141|92.0|287/293| GO:SWS:NREP 3 GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation| SEG 22->38|qasvmlslsqsavsaal| BL:PDB:NREP 1 BL:PDB:REP 86->286|2fyiC|3e-13|26.3|198/228| RP:PDB:NREP 2 RP:PDB:REP 1->106|3bj6A|2e-08|7.5|106/149| RP:PDB:REP 85->286|1al3A|6e-26|19.9|201/237| RP:PFM:NREP 1 RP:PFM:REP 89->283|PF03466|4e-30|36.9|195/207|LysR_substrate| HM:PFM:NREP 2 HM:PFM:REP 86->286|PF03466|2e-54|34.3|201/209|LysR_substrate| HM:PFM:REP 5->64|PF00126|1.1e-18|48.3|60/60|HTH_1| RP:SCP:NREP 2 RP:SCP:REP 1->102|1b9mA1|1e-10|11.8|102/122|a.4.5.8| RP:SCP:REP 89->283|1i69A|2e-33|18.0|189/206|c.94.1.1| HM:SCP:REP 1->110|1b9mA1|2.4e-22|37.4|107/0|a.4.5.8|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 80->289|1uthA_|7.9e-48|32.4|210/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 3619 OP:NHOMOORG 658 OP:PATTERN -----------------------------------11111111----------1-------------- 44525-1-223-1-32211-1-1133111112----2478--12111-1---1-11----211-1264211---------123211112221-1------13---311-1---------------1---1----1-34444---213334444233311111124364431111111111111-1------43A99999BA92999AB972779CA9A233A24-444442KS111-2111-111111322112-11--11---22--1-1--1111-1--------11-----------------------------------3456666667626326334222631116232156542212631121----211112-----2298C3337666411321223234-34725A2935--97752448544679---1144456-524444444435543336-------------------------------33-18OJGONUUXYQEEFFAPPIQKJIJBLVKQOTUM-2KGC4A678I6H6OB7A44423D611222-233327612114121123113-313234331563562133--1-1111-1---------12122987553636342542222264533553474791--3225------A7A93C8CBBACA99CC-CCBCCA9CABCACBBBCB7EIE9C142A6A899AA9A889885BAA8778A--633333233333--15-----11-14289A111-12-111112219999966243A6EFIEKNEQ8KLIK6JIO121-1121241674444443385457567652211111--1-11------------1-------------------------------------331 --------------------------------------------------------------------------------------------------------------------------------------------------------------4--------------1-1------------4-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 287 STR:RPRED 100.0 SQ:SECSTR HHHHHHHHHHHHHHTccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEcTTccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHTcccEEEEEEEEcHHHHHHTcHHHHHHHHHHcTEEEEEEEEccHHHHHHHHHTTcccEEEEcccccTccEEEEEEEEEcEEEEEcTTcTTTTTcccHHHHHTcEEEEEcTTcTTHHHHHHHHHHHTcccEEEEEEccHHHHHHHHHHTccEEEEEGGGHccTTTcTTcEEEEccTTcccEEEEEEEETTccccHHHHHHHHHHc DISOP:02AL 83-85,87-87| PSIPRED ccccHHHHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHccccEEEccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHcccccEEEEEcccccccEEEEEEEcccEEEEEccccHHHcccccHHHHccccEEEcccccHHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHcccEEEcHHHHHHHHHccccEEEEEcccccccEEEEEEEcccccccHHHHHHHHHcc //