[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF68924.1
DDBJ      :             acyl-CoA dehydrogenase domain protein
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  511/915 : Eukaryota  174/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:387 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   32->382 2d29A PDBj 3e-46 33.6 %
:RPS:PDB   7->386 1egcA PDBj 3e-75 26.7 %
:RPS:SCOP  7->231 1rx0A2  e.6.1.1 * 5e-48 23.6 %
:RPS:SCOP  232->381 1bucA1  a.29.3.1 * 8e-30 24.7 %
:HMM:SCOP  1->232 1jqiA2 e.6.1.1 * 1e-61 36.2 %
:HMM:SCOP  232->382 1bucA1 a.29.3.1 * 1.3e-40 33.1 %
:RPS:PFM   7->116 PF02771 * Acyl-CoA_dh_N 4e-17 37.3 %
:RPS:PFM   121->171 PF02770 * Acyl-CoA_dh_M 1e-08 43.1 %
:RPS:PFM   232->361 PF00441 * Acyl-CoA_dh_1 5e-18 34.6 %
:HMM:PFM   232->380 PF00441 * Acyl-CoA_dh_1 1.2e-33 32.2 149/150  
:HMM:PFM   7->116 PF02771 * Acyl-CoA_dh_N 6.4e-27 32.1 109/113  
:HMM:PFM   121->171 PF02770 * Acyl-CoA_dh_M 8e-21 41.2 51/52  
:BLT:SWISS 31->381 ACDB_BACSU 5e-46 31.0 %
:PROS 339->358|PS00073|ACYL_COA_DH_2

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF68924.1 GT:GENE ACF68924.1 GT:PRODUCT acyl-CoA dehydrogenase domain protein GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 975976..977139 GB:FROM 975976 GB:TO 977139 GB:DIRECTION + GB:PRODUCT acyl-CoA dehydrogenase domain protein GB:NOTE identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 GB:PROTEIN_ID ACF68924.1 GB:DB_XREF GI:194408705 LENGTH 387 SQ:AASEQ MKSIEKDKYQDIRDAVRSLCSEFDDKYHRKIDEAKAYPEEFVNKLTKAGWLAALIPEEFGGSGLGLTEASIIMEEINRSGGNSGACHGQMYNMNTLLRHGSDKQKEFWLPRIATGEWRLQSMGVTEPTAGTDTTRIKTTAIKREDRYVINGQKVWISRVQHSDWMILLVRTTPLANVKRKSEGMSIFMVDIKEAMKNGMTVRPIPNMVNHETNELFFDNLEIPEENLIGEEGMGFHYILDGLNAERTLIAAECIGDGYWFMDRVTRYTCEREVFGRPIGQNQGVQFPIAEAFIAVEAANLMRFKACELFDQHLDCGAQANMAKYLAAKASWEAANACLQFHGGYGFACEYDIERKFRETRLYQVAPISTNLILSYIAEHVLEMPRSF GT:EXON 1|1-387:0| BL:SWS:NREP 1 BL:SWS:REP 31->381|ACDB_BACSU|5e-46|31.0|342/379| PROS 339->358|PS00073|ACYL_COA_DH_2|PDOC00070| BL:PDB:NREP 1 BL:PDB:REP 32->382|2d29A|3e-46|33.6|348/386| RP:PDB:NREP 1 RP:PDB:REP 7->386|1egcA|3e-75|26.7|375/387| RP:PFM:NREP 3 RP:PFM:REP 7->116|PF02771|4e-17|37.3|110/113|Acyl-CoA_dh_N| RP:PFM:REP 121->171|PF02770|1e-08|43.1|51/53|Acyl-CoA_dh_M| RP:PFM:REP 232->361|PF00441|5e-18|34.6|130/150|Acyl-CoA_dh_1| HM:PFM:NREP 3 HM:PFM:REP 232->380|PF00441|1.2e-33|32.2|149/150|Acyl-CoA_dh_1| HM:PFM:REP 7->116|PF02771|6.4e-27|32.1|109/113|Acyl-CoA_dh_N| HM:PFM:REP 121->171|PF02770|8e-21|41.2|51/52|Acyl-CoA_dh_M| GO:PFM:NREP 6 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02770|IPR006091| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02770|IPR006091| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 7->231|1rx0A2|5e-48|23.6|216/231|e.6.1.1| RP:SCP:REP 232->381|1bucA1|8e-30|24.7|150/151|a.29.3.1| HM:SCP:REP 1->232|1jqiA2|1e-61|36.2|224/231|e.6.1.1|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 232->382|1bucA1|1.3e-40|33.1|151/151|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 6452 OP:NHOMOORG 715 OP:PATTERN 33----6788A88977-243432C96661-7B-----------------------------4551--- 4556U3-5---746V*jMM-Mm33gpMMMMMUomymZl**4f8h-133-11-456646--HGV1AEQMIMD--------384B-----11111122---41445564545--------------------------66588---A3-2-1------------------12-------------78867--1C746666646656665663455545657BA8A11------43-------------------1--1------------------------------------------------------------------111315444444444423222221-6-314-13-A91596-17---11-3-71-QKKT-----41WLM442QFRPK99898996867-44C44F4CA8Y-5664536567679E9UAACD7677D9H111111119----996-----------------------------1NMWN17PHBOBBDFOBA7BBA99JEDDDD7GQAUWrog44EGDB5BFFOEGILX229----56-------2--G663XBC-----------765-9-5--77879A66------------1--------1-----42-7D385D915544447C444485B6475---111-------2-4-1--2223233222-2222222212222222221-------13231333332313113-1121111-----------------6111117777-JB33---------------IIIEICG79861JJKL7GACGB9AAD536111111111----2-----24-224555555555------12AA98AA----------1-------------------------1--11-1------ ----569-941-AA9DAB9D9A9A89BCC8A99888AA9A8AABBB977679BE897667774-1----1--1-1------11111---7B7A8876545998CCC-B75HDTBBEB77889D9IB4I8Q*D-EBP6953C78GB49A56C82E9CBBM9FG7HBD877CBEGBG2234j43354647E93544E8999 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 383 STR:RPRED 99.0 SQ:SECSTR ###cccHHHHHHHHHHHHHHHHHTTTTHHHHHHHccccHHHHHHHHHHTcccTTccTTTTcccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHTccccEEEEEcccTTccccGGGcccEEEEcccEEEEEEEEEEEETGGGccEEEEEEEcccccTTccHHHHEEEEEEEcccTTcTTEEEcccccccTccEEEEEEEEEEEEGGGccccTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTcccccccGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGcTTcHHHHHHHHHGGGGTTTccHHHHHHHHHHHHHHTTcc# DISOP:02AL 387-388| PSIPRED ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccEEEEEEEcccccccccHHHcEEEEEEEccEEEEEcEEEEEcccccccEEEEEEEcccccccccccccEEEEEEEccccccccEEEEcccccccccccEEEEccEEccHHHHccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccc //