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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF68981.1
DDBJ      :             IS26 transposase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  134/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.55.3
:234 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   75->203 1cz9A PDBj 3e-09 12.6 %
:RPS:SCOP  75->205 1a5vA  c.55.3.2 * 4e-04 13.2 %
:HMM:SCOP  75->191 1c0mA2 c.55.3.2 * 1.6e-05 21.9 %
:RPS:PFM   3->120 PF03050 * Transposase_25 3e-24 47.5 %
:HMM:PFM   3->121 PF03050 * Transposase_25 4e-18 25.2 119/178  
:HMM:PFM   75->182 PF00665 * rve 2.9e-12 20.8 106/120  
:BLT:SWISS 1->219 T431_STAAW 3e-42 41.9 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF68981.1 GT:GENE ACF68981.1 GT:PRODUCT IS26 transposase GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(1524337..1525041) GB:FROM 1524337 GB:TO 1525041 GB:DIRECTION - GB:PRODUCT IS26 transposase GB:NOTE identified by match to protein family HMM PF00665 GB:PROTEIN_ID ACF68981.1 GB:DB_XREF GI:194408762 LENGTH 234 SQ:AASEQ MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFET GT:EXON 1|1-234:0| BL:SWS:NREP 1 BL:SWS:REP 1->219|T431_STAAW|3e-42|41.9|210/224| RP:PDB:NREP 1 RP:PDB:REP 75->203|1cz9A|3e-09|12.6|127/139| RP:PFM:NREP 1 RP:PFM:REP 3->120|PF03050|3e-24|47.5|118/160|Transposase_25| HM:PFM:NREP 2 HM:PFM:REP 3->121|PF03050|4e-18|25.2|119/178|Transposase_25| HM:PFM:REP 75->182|PF00665|2.9e-12|20.8|106/120|rve| RP:SCP:NREP 1 RP:SCP:REP 75->205|1a5vA|4e-04|13.2|129/146|c.55.3.2| HM:SCP:REP 75->191|1c0mA2|1.6e-05|21.9|114/0|c.55.3.2|1/1|Ribonuclease H-like| OP:NHOMO 508 OP:NHOMOORG 138 OP:PATTERN ---------------------------------------------------1---------------- --4---2646B--6------------------------2--398-----------------------1----------------------------7---------------------------------------------1---2-------------------1-----------------8--------------31-1--------------5-------9-------26214-12-5552-4-38788---24-1-------1-----1--C3-------------------------------------3344-------------------------9-1---------------B--117----------------2-3----------22212221224---6--G2-27--4--G---E-------131------1----------4-1---------------------------------4--51-------------7----11-12114--------2------------3---------------------1---------------------------------------------------------------------------112------1-3--1---------------------------1-2------29---2---4------F1-----------A--3--3---A------------22121-1-22--2--------------1---------------3-5-3---------2------------------------1--B--------------4-----11------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------6--------------------------2-----------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 128 STR:RPRED 54.7 SQ:SECSTR ##########################################################################EEEEEEEcGGGTTccEEEEEEETTTccEEEEEEccccHHHHHHHHHHH#HHHHHccccEEEEEccHHHHcHHHHHHHHHHTcEEEEEcTTcHHHHHHHHHHHHHHHHHHHHHHHHTTccccccHHHHHH############################### DISOP:02AL 1-2,234-235| PSIPRED ccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHccccEEHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEEccEEEEEEEEEcccccEEEEEEEcccccHHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHcccccccccEEEEccccHHHHHccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEccc //