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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF68998.1
DDBJ      :             pyridoxal-5'-phosphate-dependent enzyme, beta subunit
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  450/915 : Eukaryota  114/199 : Viruses  0/175   --->[See Alignment]
c.79.1
:351 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   38->330 1m54F PDBj 2e-15 26.3 %
:RPS:PDB   6->325 2c2gA PDBj 8e-45 12.3 %
:RPS:SCOP  24->323 1d6sA  c.79.1.1 * 6e-62 22.7 %
:HMM:SCOP  1->334 1tdjA1 c.79.1.1 * 5.1e-69 30.2 %
:RPS:PFM   24->313 PF00291 * PALP 3e-15 29.3 %
:HMM:PFM   23->315 PF00291 * PALP 3.9e-43 28.2 273/297  
:BLT:SWISS 4->330 YSL1_CAEEL 6e-33 31.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF68998.1 GT:GENE ACF68998.1 GT:PRODUCT pyridoxal-5'-phosphate-dependent enzyme, beta subunit GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(562222..563277) GB:FROM 562222 GB:TO 563277 GB:DIRECTION - GB:PRODUCT pyridoxal-5'-phosphate-dependent enzyme, beta subunit GB:NOTE identified by match to protein family HMM PF00291 GB:PROTEIN_ID ACF68998.1 GB:DB_XREF GI:194408779 LENGTH 351 SQ:AASEQ MMSSNWVKNAINEINADHQRSADTHLIRLPLSAFPGIQLYLKDESTHPTGSLKHRLARSLFLYGLCNGWIKEGTPIIEASSGSTAISEAWFARLLGLPFIAVMPACTAKRKIEQIQFYGGHCHFVESACEIYAASERLAHELNGHYMDQFTYAERATDWRGNNNIADSIFRQMRNELHPVPRFIVMSAGTGGTSATIGRYIRCQGYDTQLMVVDPENSVFLPYWQDRDASLRSPVGSKIEGIGRPRVEPSFIPDVVDEMLRVPDAASVATAHWLETQLGRKVGASTGTNMWGALQLAARMREAGETGAIVTLLCDSGDRYLDTYYHPAWVSDHIGDLTPWSAAIAKLLTGD GT:EXON 1|1-351:0| BL:SWS:NREP 1 BL:SWS:REP 4->330|YSL1_CAEEL|6e-33|31.6|323/435| TM:NTM 2 TM:REGION 57->79| TM:REGION 87->108| SEG 187->196|sagtggtsat| BL:PDB:NREP 1 BL:PDB:REP 38->330|1m54F|2e-15|26.3|278/344| RP:PDB:NREP 1 RP:PDB:REP 6->325|2c2gA|8e-45|12.3|309/447| RP:PFM:NREP 1 RP:PFM:REP 24->313|PF00291|3e-15|29.3|276/293|PALP| HM:PFM:NREP 1 HM:PFM:REP 23->315|PF00291|3.9e-43|28.2|273/297|PALP| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF00291|IPR001926| GO:PFM GO:0008152|"GO:metabolic process"|PF00291|IPR001926| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00291|IPR001926| RP:SCP:NREP 1 RP:SCP:REP 24->323|1d6sA|6e-62|22.7|291/323|c.79.1.1| HM:SCP:REP 1->334|1tdjA1|5.1e-69|30.2|321/331|c.79.1.1|1/1|Tryptophan synthase beta subunit-like PLP-dependent enzymes| OP:NHOMO 825 OP:NHOMOORG 569 OP:PATTERN ---11---------------------------1----------2-----------------1------ 1--122--11-2--11122-21--2122122211111132-2211111-11-3122-2--322-33333211-------1--3111-1------------121222-121---------------------11-1----1----2-1-1111-11--1-1--111-12312------------1--------1111111111111111111---11111-1----------11-11121121111111-11111--1--2--2--------------1----------------------------------------------31-112-1121-2-1111-111--1----1--111--1--1-111----1-12--1-------21211-11221------------21-11121121-1---11211111112-11--1-1121-11111111---11-1------------------------------1-2111------11-1---------1---1--1-1-3-1--112--1111-2111111111-11-------------2---1--1---111-----1111-2112221-2--1111111----------2------11-11--21--1212111211111122121---1111------3312-321111111111-11111111111111111113332244212122212111111213111---1--322222222222---1-----------4-1---------------111-11------33332133-11111221----------1111222221111122212112332222--21112211--------------------------------------1---------1 ----212-----111--2-1111121111-111111-21211111---1312-2-1------2122222211-1211-11222-1211---1-1211111111211-34-1--1--1-----1-33---5C1-2-2-------------------------112----11-35--1111G11121-32---11133213 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 348 STR:RPRED 99.1 SQ:SECSTR GGGGHTTccTTTccccccccccEEEcHHHHHHHHccccEEEEETTccccccTHHHHHHHHHHHHHHHHTTccccEEEEccccHHHHHHHHHHHHHTccEEEEEEGGGccTTTHHHHHTTcEEEEEcccHHHHHHHHHHHTTccEEEccTTcHHHHHHHHHHHHHHHHHHHHHTTcHHTccccEEEEccccTHHHHHHHHHHHHHHHHHHTTccccccEEEEEEETTcccHHHHHTTTTTTcccccHHHHHHHHHHTTcEEEEEcHHHHHHHHHHHHHTTccccHHHHHHHHHHHHHHHTTGcccTTccEEEEEcccGGGGHHHHHHHTTccHHcccccccHHHHHHHH### DISOP:02AL 1-4,350-352| PSIPRED ccHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccEEEEEEcccccccccHHHHHHHHHHHHHHccccccccEEEEccccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHcccEEccccccccccccccccccHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHccccccccccccEEEccccccccHHHHHHHccEEEEEcHHHHHHHHHHHHHHcccEEccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccHHHcccHHHHHHHcccccHHHHHHHHHcccc //