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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF69151.1
DDBJ      :             LysM domain/ErfK/YbiS/YcfS/YnhG family protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  299/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
b.160.1d.7.1
:321 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   53->240 1y7mA PDBj 4e-09 34.9 %
:RPS:PDB   32->103 2djpA PDBj 1e-11 23.9 %
:RPS:SCOP  53->91 1y7mA2  d.7.1.1 * 3e-06 39.5 %
:RPS:SCOP  104->240 1zatA1  b.160.1.1 * 7e-22 25.4 %
:HMM:SCOP  44->93 1y7mA2 d.7.1.1 * 0.00016 35.4 %
:HMM:SCOP  98->241 1zatA1 b.160.1.1 * 1.8e-30 45.5 %
:RPS:PFM   104->238 PF03734 * YkuD 2e-12 43.0 %
:HMM:PFM   103->240 PF03734 * YkuD 1.9e-23 34.8 112/116  
:HMM:PFM   48->91 PF01476 * LysM 6.4e-10 31.0 42/44  
:BLT:SWISS 1->321 YCFS_ECOLI e-152 86.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF69151.1 GT:GENE ACF69151.1 GT:PRODUCT LysM domain/ErfK/YbiS/YcfS/YnhG family protein GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(1302122..1303087) GB:FROM 1302122 GB:TO 1303087 GB:DIRECTION - GB:PRODUCT LysM domain/ErfK/YbiS/YcfS/YnhG family protein GB:NOTE identified by match to protein family HMM PF01476; match to protein family HMM PF03734 GB:PROTEIN_ID ACF69151.1 GB:DB_XREF GI:194408932 LENGTH 321 SQ:AASEQ MFNNTRLSRWWALLALTATIMLALPAQANTWPLPPPGSRLVGENKFHVVEDDGGSLEAIAKKYNVGFLALLQANPGIDPYVPRAGSVLTIPLQTLLPDAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTPTANIRARYKAQGIDLPAVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDGDIETLFRQVTPGTKVNIINTPIKASVEPGGVRLVEVHQPLSKNIGDDPQVLPIVLNGPMQTFKDAPQTDAAVMEHVMEVRSGMPVDVTRQSEAKPQSL GT:EXON 1|1-321:0| BL:SWS:NREP 1 BL:SWS:REP 1->321|YCFS_ECOLI|e-152|86.6|320/320| SEG 12->26|allaltatimlalpa| BL:PDB:NREP 1 BL:PDB:REP 53->240|1y7mA|4e-09|34.9|152/161| RP:PDB:NREP 1 RP:PDB:REP 32->103|2djpA|1e-11|23.9|71/77| RP:PFM:NREP 1 RP:PFM:REP 104->238|PF03734|2e-12|43.0|128/136|YkuD| HM:PFM:NREP 2 HM:PFM:REP 103->240|PF03734|1.9e-23|34.8|112/116|YkuD| HM:PFM:REP 48->91|PF01476|6.4e-10|31.0|42/44|LysM| RP:SCP:NREP 2 RP:SCP:REP 53->91|1y7mA2|3e-06|39.5|38/48|d.7.1.1| RP:SCP:REP 104->240|1zatA1|7e-22|25.4|114/126|b.160.1.1| HM:SCP:REP 44->93|1y7mA2|0.00016|35.4|48/0|d.7.1.1|1/1|LysM domain| HM:SCP:REP 98->241|1zatA1|1.8e-30|45.5|123/0|b.160.1.1|1/1|L,D-transpeptidase catalytic domain-like| OP:NHOMO 771 OP:NHOMOORG 300 OP:PATTERN -------------------------------------------------------------------- -11----------------------------------------------------------------------------------122----------------------------------------------------------111-111--11----------1111---------------------111111111111111121-11--1121-1-----------1----------------------------------------------------------------------------------------------------------1-------1-------1---11-------------1-----1111146B9966689A9733443444436-7B97C88957--42236596566656---4136566223-----------------------------------------------------------------------------------------------1------------1111111111-------------1-----22213121222-2--211------------------------22331-1-1---111111111111111111111-11111------43222314444444444-444444444444444444444422111443444444443434424344443111-1-11111111-1--1111111112-11--------------------------1-11111111111111111-------------11111111111----1-----------1----------------------------------------------11-1------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 172 STR:RPRED 53.6 SQ:SECSTR ###############################ccccccccccEEEEEEcccT#TccHHHHHHHHTccHHHHHHHHTccccccGGGcccEEEEEEccccccccccEETTTTEEEEEE####TTEEEEEEccEEcTT##cccccEEEEEEEEEEcc###########################cGGGTTEEEEEcc##TTcEEEccccGGGTTcEEEcccEE#cHHHHHHHHHHccTTcEEEE################################################################################# DISOP:02AL 1-1,311-322| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHcEEccccccccEEEcccEEEEccccccHHHHHHHHcccHHHHHHccccccccccccccEEEccccccccccccccEEEEccccEEEEEEccccEEEEEEEEEccccccccccEEEEEEEEEEEcccccccHHHHHHcccccccccccccccccccccEEEEEccccccEEEEEccccccccccccccccEEccHHHHHHHHHHcccccEEEEEccHHHHHcccccEEEEEEEccccccccccccEEEEEcccHHHHccccccccHHHHHHHHHHHccccEEEccccccccccc //