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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF69297.1
DDBJ      :             transcriptional regulator, DeoR family
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  552/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.124.1
:250 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   1->228 3dlxB PDBj 8e-26 11.9 %
:RPS:SCOP  4->59 1lvaA4  a.4.5.35 * 2e-12 17.9 %
:RPS:SCOP  67->205 1poiB  c.124.1.3 * 8e-22 17.3 %
:HMM:SCOP  1->79 1stzA1 a.4.5.51 * 2.1e-12 34.2 %
:HMM:SCOP  67->229 1lk5A1 c.124.1.4 * 3.3e-30 33.3 %
:RPS:PFM   4->55 PF08220 * HTH_DeoR 3e-12 57.7 %
:RPS:PFM   73->225 PF00455 * DeoR 2e-31 45.8 %
:HMM:PFM   72->225 PF00455 * DeoR 2e-36 37.7 154/157  
:HMM:PFM   4->59 PF08220 * HTH_DeoR 3.8e-18 51.8 56/57  
:BLT:SWISS 1->246 YCIT_ECOLI e-113 82.9 %
:PROS 4->38|PS00894|HTH_DEOR_1

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF69297.1 GT:GENE ACF69297.1 GT:PRODUCT transcriptional regulator, DeoR family GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 1846723..1847475 GB:FROM 1846723 GB:TO 1847475 GB:DIRECTION + GB:PRODUCT transcriptional regulator, DeoR family GB:NOTE identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279 GB:PROTEIN_ID ACF69297.1 GB:DB_XREF GI:194409078 LENGTH 250 SQ:AASEQ MNSRQQSILQMVVDKGQMSVAELAKITGVSEVTIRQDLNTLEKQSYLRRAHGFAVSLESDDVETRMMTNYTLKRRLAEFAASLVSPGESVFIENGSSNALLARTLAEQKDVTIITVSSYIAHLLKETPCEVILLGGIYQKKSESMVGPLTRQFIHQVHFSKAFIGIDGWQADTGFTGRDMMRSDVVNAVLEKGSEAIVLTDSSKFGCVHPYPLGPLSRFHRVITDSKISASDQMQLEHAGLLVNVIGSSV GT:EXON 1|1-250:0| BL:SWS:NREP 1 BL:SWS:REP 1->246|YCIT_ECOLI|e-113|82.9|246/249| PROS 4->38|PS00894|HTH_DEOR_1|PDOC00696| RP:PDB:NREP 1 RP:PDB:REP 1->228|3dlxB|8e-26|11.9|227/465| RP:PFM:NREP 2 RP:PFM:REP 4->55|PF08220|3e-12|57.7|52/56|HTH_DeoR| RP:PFM:REP 73->225|PF00455|2e-31|45.8|153/157|DeoR| HM:PFM:NREP 2 HM:PFM:REP 72->225|PF00455|2e-36|37.7|154/157|DeoR| HM:PFM:REP 4->59|PF08220|3.8e-18|51.8|56/57|HTH_DeoR| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF08220|IPR001034| GO:PFM GO:0005622|"GO:intracellular"|PF08220|IPR001034| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF08220|IPR001034| RP:SCP:NREP 2 RP:SCP:REP 4->59|1lvaA4|2e-12|17.9|56/60|a.4.5.35| RP:SCP:REP 67->205|1poiB|8e-22|17.3|139/260|c.124.1.3| HM:SCP:REP 1->79|1stzA1|2.1e-12|34.2|79/87|a.4.5.51|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 67->229|1lk5A1|3.3e-30|33.3|144/150|c.124.1.4|1/1|NagB/RpiA/CoA transferase-like| OP:NHOMO 2142 OP:NHOMOORG 558 OP:PATTERN ------------------------2--1---------------------------------------- 33--9213445111-------3---5------322212231--1812-13326461-4--213465A655311111112---1--------1--------12--14-5-A--------------------------22211----------------------------1-------------311--22-31433333234232322275442433411123235555566A2222222222222224322342-1591-22144--871411--2433343333344444444444444444444444444432221333551167332234363413--24422213-2121----1--1--42225222--12--------1-113---1311144444444446-111112221B--B665455A98652----3224234422111111113112---4-------------------------------1---111113555532222244772222125362232--1211-1111-1324-------411111111--------1---12--1---1-------11-----1-----------------------------5382-1111233111111122211111111-------------8588764BA9DBDCDBB-ACBBABBBBBAEBABBCB6ECE56433EADEEDEDDCDDDEEDAA98BBA94-766666556666---------------136444747223225885----------2133232533222222455----------333733333532691111111----------4---------------------1---1-1------11-------41--12111--1 -------------2------------------------------------------------------------------------------------------------------------------------------------------------1----1------4---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 247 STR:RPRED 98.8 SQ:SECSTR EEETTccEEccGGGcTTHHHHTTcEEEEEEEEcEEEcTTcccGGGccccGGGccEEEEccccccccccccHHHHHHHHHHGGGccTTEEEEEcTTHHHHHGGGcccTTccEEEEETTTEEEEcccccGTTcccTTccccEEEEEccHHHHHHHHHTTcccEEEEcccEEETTccEETTcccccTTHHHHTccTTcEEEEEGEEcEEccccccccccccccEEEcccEEEEETTEEEcTTcccTTHHc### DISOP:02AL 1-1| PSIPRED ccHHHHHHHHHHHHcccEEHHHHHHHHcccHHHHHHHHHHHHHcccEEEEccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHHccccEEEEEccHHHHHHHHHcccEEEEEccEEEcccccEEcHHHHHHHHHccccEEEEEEcccccccccccccHHHHHHHHHHHHHcccEEEEEccccccccEEEEEEEHHHccEEEccccccHHHHHHHHHcccEEEEEcccc //