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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF69369.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  402/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.4.5d.110.2
:260 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->251 1mkmB PDBj 2e-29 31.0 %
:RPS:PDB   81->247 3d3oB PDBj 3e-33 10.8 %
:RPS:SCOP  7->80 1mkmA1  a.4.5.33 * 3e-07 25.7 %
:RPS:SCOP  80->250 1td5A  d.110.2.2 * 1e-41 26.9 %
:HMM:SCOP  7->80 1mkmA1 a.4.5.33 * 1.1e-11 37.8 %
:HMM:SCOP  76->252 1td5A_ d.110.2.2 * 1.6e-46 40.1 %
:RPS:PFM   130->246 PF01614 * IclR 3e-17 39.3 %
:HMM:PFM   122->247 PF01614 * IclR 3.4e-42 37.3 126/129  
:HMM:PFM   9->58 PF09339 * HTH_IclR 7.4e-09 30.0 50/52  
:BLT:SWISS 1->260 YFAX_ECOLI e-129 87.3 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF69369.1 GT:GENE ACF69369.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2446995..2447777) GB:FROM 2446995 GB:TO 2447777 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:NOTE identified by match to protein family HMM PF01614 GB:PROTEIN_ID ACF69369.1 GB:DB_XREF GI:194409150 LENGTH 260 SQ:AASEQ MLESSKVPALTRAIDILNLIARIGPCSAAIIIETLRIPKSTAYLLLNELKRQRFISLDHQDNYCLWTKLVELSGHALSKMDLRELARPRLTQLMDETGLLCHLGIIDHENAYYILKVESSSTISVRSHEGKSLSLYRSGIGKCLLAWQPAAVRKAIIEQLVWERATLTTITEPQQLNDELERIRQRGWSFDNGEDYPDVRCVAAPVFNARNELTAAISVVGTRLQINEENLDYLAGKAIACAKDISRLLGWKSPFDSLAS GT:EXON 1|1-260:0| BL:SWS:NREP 1 BL:SWS:REP 1->260|YFAX_ECOLI|e-129|87.3|260/260| BL:PDB:NREP 1 BL:PDB:REP 10->251|1mkmB|2e-29|31.0|242/247| RP:PDB:NREP 1 RP:PDB:REP 81->247|3d3oB|3e-33|10.8|158/163| RP:PFM:NREP 1 RP:PFM:REP 130->246|PF01614|3e-17|39.3|117/127|IclR| HM:PFM:NREP 2 HM:PFM:REP 122->247|PF01614|3.4e-42|37.3|126/129|IclR| HM:PFM:REP 9->58|PF09339|7.4e-09|30.0|50/52|HTH_IclR| RP:SCP:NREP 2 RP:SCP:REP 7->80|1mkmA1|3e-07|25.7|74/75|a.4.5.33| RP:SCP:REP 80->250|1td5A|1e-41|26.9|171/179|d.110.2.2| HM:SCP:REP 7->80|1mkmA1|1.1e-11|37.8|74/0|a.4.5.33|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 76->252|1td5A_|1.6e-46|40.1|177/0|d.110.2.2|1/1|GAF domain-like| OP:NHOMO 1325 OP:NHOMOORG 411 OP:PATTERN ------------------------91132-52------------------------------------ --3151-2334---12211-14--2D111111343476KM11-1353----2A7B4-1--115-67G78621111233----5---11-----1---------------1--------------------------22211----3-------------------------------------2311311-41122222232232222253331123113443--------52--------------------1-1-11----------1-----------------------------------------------------13--2-----------2--1--------1----11-11-1325-1-2---------------2-212--723-2122222222214-111--2-193--4442453444546211-34A111232211111111111--1----------------------------------6--188555557655555499AA66663692K9BB6--332323226272A31111---------------221-1----11-------232142311-----------1-------------------------2--12-2-------------------------1-1------422423-7446766645-4564656454475666666555341216265646666656555543444431-212222222222----------------341112-2--1-1111111111-22333-1---2233332321333-------------3------1112-------1-1------------------------------------------------------112111--- --------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 244 STR:RPRED 93.8 SQ:SECSTR #########HHHHHHHHHHHTTcccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEEEEEETTEEEEEEEEccccTTTcHHHHHHHHHHHHHHHHHccEEEEEEEETTEEEEEEEEcccccccccccccccEEGGcHHHHHTTcHHHHHHHHHHHHHHcccHHHHGGGTcccccHHHHHHHHHHHcEEEEEccccTTEEEEEEEccccTTccEEEEEEEHHHHHHHHHTHHHHHHHHHHHHHHHTccccccc####### DISOP:02AL 1-5,8-8,253-253,255-261| PSIPRED ccccccccHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccEEEcHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccEEEEEEEccEEEEEEEEEccccEEEEEccccEEcccccHHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHccEEEccccccccEEEEEEEEcccccEEEEEEEEEEHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccccc //