[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF69386.1
DDBJ      :             cobalamin periplasmic binding protein
Swiss-Prot:BTUF_SALCH   RecName: Full=Vitamin B12-binding protein;Flags: Precursor;

Homologs  Archaea  19/68 : Bacteria  333/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.92.2
:262 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->262 1n2zA PDBj e-117 83.1 %
:RPS:PDB   21->258 1efdN PDBj 4e-40 17.2 %
:RPS:SCOP  20->262 1n2zA  c.92.2.2 * 6e-83 83.1 %
:HMM:SCOP  18->258 1n2zA_ c.92.2.2 * 1.4e-57 39.9 %
:RPS:PFM   22->213 PF01497 * Peripla_BP_2 1e-22 40.4 %
:HMM:PFM   22->213 PF01497 * Peripla_BP_2 2.2e-30 30.7 192/238  
:BLT:SWISS 20->262 BTUF_SALCH e-139 99.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF69386.1 GT:GENE ACF69386.1 GT:PRODUCT cobalamin periplasmic binding protein GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(249005..249793) GB:FROM 249005 GB:TO 249793 GB:DIRECTION - GB:PRODUCT cobalamin periplasmic binding protein GB:NOTE identified by match to protein family HMM PF01497 GB:PROTEIN_ID ACF69386.1 GB:DB_XREF GI:194409167 LENGTH 262 SQ:AASEQ MFRALVALLLTLPVWLYAAPRVITLSPANTELAFAAGITPVGVSSYSDYPPEAQKIEQVSTWQGMNLERIVALKPDLVVAWRGGNAERQVNQLTSLGIKVMWVDAVSIEQIADTLRQLAAWSPQPEKAQQAAQTLLNEYAALNAEYAGKAKKRVFLQFGMNPLFTSGKGSIQHQVLTTCGGENVFADSRVPWPQVSREQVLARHPQAIIVAGKAGEILKIEQYWGNLLKIPVIPLNSDWFERASPRIILAAKQLCNALSQVN GT:EXON 1|1-262:0| SW:ID BTUF_SALCH SW:DE RecName: Full=Vitamin B12-binding protein;Flags: Precursor; SW:GN Name=btuF; OrderedLocusNames=SCH_0206; SW:KW Complete proteome; Disulfide bond; Periplasm; Signal; Transport. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 20->262|BTUF_SALCH|e-139|99.6|243/266| GO:SWS:NREP 2 GO:SWS GO:0042597|"GO:periplasmic space"|Periplasm| GO:SWS GO:0006810|"GO:transport"|Transport| SEG 4->19|alvallltlpvwlyaa| BL:PDB:NREP 1 BL:PDB:REP 20->262|1n2zA|e-117|83.1|243/245| RP:PDB:NREP 1 RP:PDB:REP 21->258|1efdN|4e-40|17.2|238/262| RP:PFM:NREP 1 RP:PFM:REP 22->213|PF01497|1e-22|40.4|188/235|Peripla_BP_2| HM:PFM:NREP 1 HM:PFM:REP 22->213|PF01497|2.2e-30|30.7|192/238|Peripla_BP_2| GO:PFM:NREP 2 GO:PFM GO:0005381|"GO:iron ion transmembrane transporter activity"|PF01497|IPR002491| GO:PFM GO:0006827|"GO:high-affinity iron ion transport"|PF01497|IPR002491| RP:SCP:NREP 1 RP:SCP:REP 20->262|1n2zA|6e-83|83.1|243/245|c.92.2.2| HM:SCP:REP 18->258|1n2zA_|1.4e-57|39.9|238/0|c.92.2.2|1/1|"Helical backbone" metal receptor| OP:NHOMO 431 OP:NHOMOORG 354 OP:PATTERN 11---1---------1-----11-------1------------1-211-1----1111111------- -------1-------------1--------------------------------------11--------------------2----------------1-----1--1----------------111111111-1-11--2131--------1-------------11--------------3232211--11---------------131111---2223---2222212211111111111111111111-----------------------------------------------------------------------11-1111111111-----1111111--3---311----11--211-1--21----------------------------------------11-----------------------------------------------------------------------------------2---11111111111111111111111111112--111121--2111111111---11---------1111-22111-11---------1---1---1-11121--1----1-----------1------1111111-11-1111121211111122121---1111------211111-1222122211-211122212122211111111112111111111111111111121-21111--122222222222--------------1-11---1-------1-------------1111111111111111------------1---11111111211------------------11------------1---------------------------1121111111--- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 243 STR:RPRED 92.7 SQ:SECSTR ###################ccEEEccHHHHHHHHHTTccccEEccHHHHHcccTTcEEccccccccHHHHHHHcccEEEEETTcccHHHHHHHccEEEEcccccccHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHGGGGcccccEEEEEEEETTEEEEEcTTcTTHHHHHHTTccccccccTTcEEEEcGGGGGGccccEEEEEcHHHHHHHTcHHHHHcHHHcEEEEccccTTccHHHHHHHHHHHHHHHHHcc DISOP:02AL 262-263| PSIPRED cHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHcccccEEEcccccccHHHHHcccccccccccHHHHHHccccEEEEEcccccHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccEEEEcccccHHHHHHHHcccccccccccccccccHHHHHHHcccEEEEEcccHHHHHccHHHHcccccEEEEEcHHHHccccHHHHHHHHHHHHHHcccc //