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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF69445.1
DDBJ      :             tetratricopeptide repeat protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  223/915 : Eukaryota  76/199 : Viruses  0/175   --->[See Alignment]
a.118.18
:497 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   72->330 1ouvA PDBj 4e-16 31.3 %
:RPS:PDB   35->117 3e4bD PDBj 6e-10 22.9 %
:RPS:PDB   196->341 3e4bC PDBj 2e-24 23.7 %
:RPS:SCOP  35->118 1klxA  a.118.18.1 * 8e-07 27.4 %
:RPS:SCOP  224->341 1klxA  a.118.18.1 * 2e-12 19.8 %
:HMM:SCOP  39->122 1klxA_ a.118.18.1 * 1.8e-12 32.1 %
:HMM:SCOP  188->357 1ouvA_ a.118.18.1 * 1.2e-23 33.7 %
:RPS:PFM   241->276 PF08238 * Sel1 6e-04 50.0 %
:RPS:PFM   279->311 PF08238 * Sel1 5e-04 51.5 %
:HMM:PFM   53->86 PF08238 * Sel1 2.2e-07 35.3 34/39  
:HMM:PFM   220->240 PF08238 * Sel1 0.0003 35.0 20/39  
:HMM:PFM   241->277 PF08238 * Sel1 1.2e-10 55.6 36/39  
:HMM:PFM   279->311 PF08238 * Sel1 8.6e-08 48.5 33/39  
:HMM:PFM   316->341 PF08238 * Sel1 0.001 34.6 26/39  
:HMM:PFM   16->55 PF08535 * KorB 4.2e-05 27.5 40/93  
:BLT:SWISS 39->342 HCPE_HELPY 5e-18 29.8 %
:REPEAT 2|21->122|206->312

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF69445.1 GT:GENE ACF69445.1 GT:PRODUCT tetratricopeptide repeat protein GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 538902..540395 GB:FROM 538902 GB:TO 540395 GB:DIRECTION + GB:PRODUCT tetratricopeptide repeat protein GB:NOTE identified by match to protein family HMM PF08238 GB:PROTEIN_ID ACF69445.1 GB:DB_XREF GI:194409226 LENGTH 497 SQ:AASEQ MIKRKWSILFLLGLSFASVCQAGDDIDALYSRIAQKDIQALNELKALAKDNNAQALAELGFIYEYGVSVSVDIPQAIKYYEQACDLDGDYGCFNAAYFYEYGIGTQKDITQAKTLAKQLREKINLSNINLDKKVSERIIGSVYSNKLEAYRDLSFRPHFIQGLSFYFYAPQSDERKLLSRIGFDSSHLARIAILWAREGDPEVAYQTAKLVSTLYFNNETKTIDIAEALKWLRISAEKGDADSQTLLGFLYEHAGLGLQPDGEKARKWYEMAAQQGNGEALYTLGRMYYSGVMVNVDYDKALYFFKKAYEKELQAAADYLAQMYFNGQSVDVDCQQSWHYYDNSYIKKMTQRDYLDYCEKDRKRRNDFSQQLPELTLEKYAGLFGRIDNIPLCQIGFVVNTNKLIHVANLRVELILKNDAGVSDERMVAFPPLGLNTLGAEQGMGDSFKSMGYLLMKNGDLCDYHKLTFTVKSATATINGKKVDLLKTDNLHIIQNR GT:EXON 1|1-497:0| BL:SWS:NREP 1 BL:SWS:REP 39->342|HCPE_HELPY|5e-18|29.8|258/355| NREPEAT 1 REPEAT 2|21->122|206->312| BL:PDB:NREP 1 BL:PDB:REP 72->330|1ouvA|4e-16|31.3|214/265| RP:PDB:NREP 2 RP:PDB:REP 35->117|3e4bD|6e-10|22.9|83/316| RP:PDB:REP 196->341|3e4bC|2e-24|23.7|139/405| RP:PFM:NREP 2 RP:PFM:REP 241->276|PF08238|6e-04|50.0|35/36|Sel1| RP:PFM:REP 279->311|PF08238|5e-04|51.5|33/36|Sel1| HM:PFM:NREP 6 HM:PFM:REP 53->86|PF08238|2.2e-07|35.3|34/39|Sel1| HM:PFM:REP 220->240|PF08238|0.0003|35.0|20/39|Sel1| HM:PFM:REP 241->277|PF08238|1.2e-10|55.6|36/39|Sel1| HM:PFM:REP 279->311|PF08238|8.6e-08|48.5|33/39|Sel1| HM:PFM:REP 316->341|PF08238|0.001|34.6|26/39|Sel1| HM:PFM:REP 16->55|PF08535|4.2e-05|27.5|40/93|KorB| RP:SCP:NREP 2 RP:SCP:REP 35->118|1klxA|8e-07|27.4|84/133|a.118.18.1| RP:SCP:REP 224->341|1klxA|2e-12|19.8|111/133|a.118.18.1| HM:SCP:REP 39->122|1klxA_|1.8e-12|32.1|84/0|a.118.18.1|1/2|HCP-like| HM:SCP:REP 188->357|1ouvA_|1.2e-23|33.7|169/0|a.118.18.1|2/2|HCP-like| OP:NHOMO 579 OP:NHOMOORG 299 OP:PATTERN -------------------------------------------------------------------- -1-------------------------------------------------------------------------------1--2-----11----Q---1----2------------------62121-1113--------------------------------------------------------1------------------------------2-----------------------------------------------------1----------------------------------------------------1111-111-1--11------------2-2------------------1-----------13222-11-11---1-111--1-11-1-1--121-31112111211--1--1----------------------12------------------------------------9--------1-------------------11-----11------1--1----1-1-11----11-21111---1-12---1-2----331--241--------311-1-------1122222222----11--1--11---2-11211--111-211-1-----1--1-----------1-2223212-31-12433-13131-2122114----1--14-434-3445464634-1112244------------------1111154552-2-1-----1-3-22131111311-113-----------1---------------------------1-111--------------116---------------1-------------------------------------211 ------1-----322----------------------------------------------------------1-----------------------------53412-a21111111111-1112-1-151-311-1111-111-1-1-11-21111221-1111--1211122---5811-1-1----11--22229 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 345 STR:RPRED 69.4 SQ:SECSTR ##################################GGGHHHHHHHHHHHTTTcTHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHTcccHHHHHHHHHHHTcTTTccccHHHHHHHHHHHTTTcTHHHcTHHHHHHHHHHHHHHcGGGccHHHHHHHHHHHHHTTcHHHHHHHHHHHHHccccccccHHHHHHHHTTTcTHHHHHHHHHHHHHHHHHcGGGccHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHcccccccHHHHHHHHHTTTTTcHHHHHHHHHHHHHHTccccccHHHHHHHHHHHHHTTcTTTTHHHHHHHHTcTTccccHHHHHHHHHHHHTTcccHHHHHHTTcEEEEEcTTHHHHHHTT#cccc##################################################################################################################### DISOP:02AL 1-2,497-498| PSIPRED ccHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccHHHHHHHHHHHHcccccccccHHHHHHcccccHHHHHHHHHcccccccHHHHcccccccccccccEEEEEEEEEEEcccEEEEEEcccEEEcccc //