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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF69557.1
DDBJ      :             putative transporter
Swiss-Prot:YBJL_SALTY   RecName: Full=Putative transport protein ybjL;

Homologs  Archaea  0/68 : Bacteria  200/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.286.1
:561 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   109->321 3d37A PDBj 3e-11 10.9 %
:RPS:PDB   307->381 3bkuB PDBj 7e-11 17.9 %
:RPS:SCOP  214->292 1vctA2  d.286.1.1 * 3e-11 27.3 %
:RPS:SCOP  291->371 1lnqA4  d.286.1.1 * 5e-05 14.3 %
:HMM:SCOP  230->286 1vctA2 d.286.1.1 * 2.4e-09 40.4 %
:HMM:SCOP  289->379 1vctA2 d.286.1.1 * 2.5e-12 26.4 %
:RPS:PFM   64->183 PF06826 * Asp-Al_Ex 2e-13 40.5 %
:RPS:PFM   230->282 PF02080 * TrkA_C 4e-08 43.4 %
:RPS:PFM   392->553 PF06826 * Asp-Al_Ex 3e-27 41.4 %
:HMM:PFM   17->182 PF06826 * Asp-Al_Ex 6.6e-43 45.2 157/169  
:HMM:PFM   385->554 PF06826 * Asp-Al_Ex 1e-44 33.9 165/169  
:HMM:PFM   228->284 PF02080 * TrkA_C 1.8e-14 38.6 57/71  
:HMM:PFM   305->372 PF02080 * TrkA_C 4.7e-12 27.9 68/71  
:BLT:SWISS 1->561 YBJL_SALTY 0.0 100.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF69557.1 GT:GENE ACF69557.1 GT:PRODUCT putative transporter GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(989976..991661) GB:FROM 989976 GB:TO 991661 GB:DIRECTION - GB:PRODUCT putative transporter GB:NOTE identified by match to protein family HMM PF02080; match to protein family HMM PF06826; match to protein family HMM TIGR01625 GB:PROTEIN_ID ACF69557.1 GB:DB_XREF GI:194409338 LENGTH 561 SQ:AASEQ MNINVADLLNGNYILLLFVVLALGLCLGKLRLGSVQLGNSIGVLVVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSALLIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGIASTQLSSALDNLSLGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAYRVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYPDAHARLDPSFRNGKEVFDRDLLDMRIVTEEIVVKNHNAVGRRLAQLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFIIGLMIGMITFQFSNFSFGIGNAAGLLFAGIMLGFLRANHPTFGYIPQGALNMVKEFGLMVFMAGVGLSAGSGISNGLGAVGGQMLIAGLVVSLVPVVICFLFGAYVLRMNRALLFGAMMGARTCAPAMEIISDTARSNIPALGYAGTYAIANVLLTLAGTLIVIIWPGLG GT:EXON 1|1-561:0| SW:ID YBJL_SALTY SW:DE RecName: Full=Putative transport protein ybjL; SW:GN Name=ybjL; OrderedLocusNames=STM0870; SW:KW Cell membrane; Complete proteome; Membrane; Repeat; Transmembrane;Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->561|YBJL_SALTY|0.0|100.0|561/561| GO:SWS:NREP 4 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| TM:NTM 10 TM:REGION 8->29| TM:REGION 32->53| TM:REGION 65->87| TM:REGION 91->113| TM:REGION 161->183| TM:REGION 381->403| TM:REGION 407->429| TM:REGION 448->470| TM:REGION 473->495| TM:REGION 538->560| SEG 15->33|lllfvvlalglclgklrlg| SEG 37->51|lgnsigvlvvslllg| RP:PDB:NREP 2 RP:PDB:REP 109->321|3d37A|3e-11|10.9|192/326| RP:PDB:REP 307->381|3bkuB|7e-11|17.9|67/82| RP:PFM:NREP 3 RP:PFM:REP 64->183|PF06826|2e-13|40.5|108/167|Asp-Al_Ex| RP:PFM:REP 230->282|PF02080|4e-08|43.4|53/71|TrkA_C| RP:PFM:REP 392->553|PF06826|3e-27|41.4|162/167|Asp-Al_Ex| HM:PFM:NREP 4 HM:PFM:REP 17->182|PF06826|6.6e-43|45.2|157/169|Asp-Al_Ex| HM:PFM:REP 385->554|PF06826|1e-44|33.9|165/169|Asp-Al_Ex| HM:PFM:REP 228->284|PF02080|1.8e-14|38.6|57/71|TrkA_C| HM:PFM:REP 305->372|PF02080|4.7e-12|27.9|68/71|TrkA_C| GO:PFM:NREP 2 GO:PFM GO:0006813|"GO:potassium ion transport"|PF02080|IPR006037| GO:PFM GO:0008324|"GO:cation transmembrane transporter activity"|PF02080|IPR006037| RP:SCP:NREP 2 RP:SCP:REP 214->292|1vctA2|3e-11|27.3|77/94|d.286.1.1| RP:SCP:REP 291->371|1lnqA4|5e-05|14.3|81/92|d.286.1.1| HM:SCP:REP 230->286|1vctA2|2.4e-09|40.4|57/0|d.286.1.1|1/2|TrkA C-terminal domain-like| HM:SCP:REP 289->379|1vctA2|2.5e-12|26.4|91/0|d.286.1.1|2/2|TrkA C-terminal domain-like| OP:NHOMO 320 OP:NHOMOORG 201 OP:PATTERN -------------------------------------------------------------------- --1-12211111----------------------------------1----------------1-----2------------------55461422---11-----------------------------------11111---1-------------------------------------------------------------------------------------------------------------1-----------11---------------------------------------------------------2-------------1-----------1-----------1-------11--1-----------3--------------------1---1-------1-------------11-------------11111111------------------------------------------1122--------1------2---------22222----------1------2----------------------1-2-1--1----1-2--111---1-1-1--------------------------1--221---------------1-----11---1-------------21112212222222222-222222222222222222222222--1222222222222222222222222--222222222222------------------111112-11111111--1-------------------1------11---11-1-22221111121111----------------------------------------------------------------1-------1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 300 STR:RPRED 53.5 SQ:SECSTR ############################################################################################################ccEEEEEEEccccccEEEEEEcc###cccTTcEEEEEETTEEEEEEEEEEEEEEEEEEEEEEEETHHHHHHccccccTccHHHHHHHHHTTcTTcccEEEcccccccccccccTTccHHHTTccHHHHcHHHHHccHHHHHHHTTcEEEEcTTccEEEEcEEccTTccccEEEEEccccTTccccEEEEEccTTcccEEEEEEccccccEEEEHHTTTcccHHcccEEEEEEEEccccEEEEEEEEEEEEEEHHHHHHHHHHHHHcTEEEEEEcEEEEEEEEEETTEE#EEcccHHHHHHccEE##################################################################################################################################################### DISOP:02AL 1-1,195-208| PSIPRED ccccHHHHHHccHHHHHHHHHHHHHHEEEEEEcccEEHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccEEEEEEEccccccHHHcccHHHHHHHccccEEEEEEEEccEEEccccccccccccEEEEEEcHHHHHHHHHHHcccccccccHHccEEEEEEEEEEEcHHHccccHHHcccccccEEEEEEEEccEEEccccccEEccccEEEEEEcHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccccEEEEccccHHHHHHHHHHHHHccccccEEEccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccc //