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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF69578.1
DDBJ      :             CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase
Swiss-Prot:RFBI_SALTY   RecName: Full=Protein rfbI;

Homologs  Archaea  4/68 : Bacteria  408/915 : Eukaryota  24/199 : Viruses  0/175   --->[See Alignment]
b.43.4c.25.1d.15.4
:330 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->323 1krhA PDBj 2e-25 28.4 %
:RPS:PDB   5->91 1a70A PDBj 6e-18 31.0 %
:RPS:PDB   80->322 1e63A PDBj 7e-40 19.0 %
:RPS:SCOP  5->91 1a70A  d.15.4.1 * 2e-18 31.0 %
:RPS:SCOP  94->187 1tvcA1  b.43.4.2 * 1e-16 27.7 %
:RPS:SCOP  191->323 1krhA2  c.25.1.2 * 1e-23 25.8 %
:HMM:SCOP  1->81 1doiA_ d.15.4.1 * 7.6e-17 34.6 %
:HMM:SCOP  94->190 1krhA1 b.43.4.2 * 2.9e-22 37.1 %
:HMM:SCOP  191->323 1qfjA2 c.25.1.1 * 1.9e-33 28.6 %
:RPS:PFM   12->76 PF00111 * Fer2 4e-05 30.2 %
:RPS:PFM   110->191 PF00970 * FAD_binding_6 3e-09 38.3 %
:RPS:PFM   201->300 PF00175 * NAD_binding_1 1e-11 32.0 %
:HMM:PFM   200->302 PF00175 * NAD_binding_1 9.3e-26 27.5 102/109  
:HMM:PFM   99->189 PF00970 * FAD_binding_6 2e-22 34.4 90/99  
:HMM:PFM   7->76 PF00111 * Fer2 2.5e-14 35.3 68/77  
:BLT:SWISS 1->330 RFBI_SALTY 0.0 100.0 %
:PROS 37->45|PS00197|2FE2S_FER_1

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF69578.1 GT:GENE ACF69578.1 GT:PRODUCT CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2221739..2222731) GB:FROM 2221739 GB:TO 2222731 GB:DIRECTION - GB:PRODUCT CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase GB:NOTE identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970 GB:PROTEIN_ID ACF69578.1 GB:DB_XREF GI:194409359 LENGTH 330 SQ:AASEQ MSHIIKIFPSNIEFSGREDESILDAALSAGIHLEHSCKAGDCGICESDLLAGEVVDSKGNIFGQGDKILTCCCKPKTALELNAHFFPELAGQTKKIVPCKVNSAVLVSGDVMTLKLRTPPTAKIGFLPGQYINLHYKGVTRSYSIANSDESNGIELHVRNVPNGQMSSLIFGELQENTLMRIEGPCGTFFIRESDRPIIFLAGGTGFAPVKSMVEHLIQGKCRREIYIYWGMQYSKDFYSALPQQWSEQHDNVHYIPVVSGDDAEWGGRKGFVHHAVMDDFDSLEFFDIYACGSPVMIDASKKDFMMKNLSVEHFYSDAFTASNNIEDNL GT:EXON 1|1-330:0| SW:ID RFBI_SALTY SW:DE RecName: Full=Protein rfbI; SW:GN Name=rfbI; OrderedLocusNames=STM2093; SW:KW 2Fe-2S; Complete proteome; Iron; Iron-sulfur;Lipopolysaccharide biosynthesis; Metal-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->330|RFBI_SALTY|0.0|100.0|330/330| GO:SWS:NREP 4 GO:SWS GO:0051537|"GO:2 iron, 2 sulfur cluster binding"|2Fe-2S| GO:SWS GO:0051536|"GO:iron-sulfur cluster binding"|Iron-sulfur| GO:SWS GO:0009103|"GO:lipopolysaccharide biosynthetic process"|Lipopolysaccharide biosynthesis| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| PROS 37->45|PS00197|2FE2S_FER_1|PDOC00175| BL:PDB:NREP 1 BL:PDB:REP 18->323|1krhA|2e-25|28.4|299/337| RP:PDB:NREP 2 RP:PDB:REP 5->91|1a70A|6e-18|31.0|87/97| RP:PDB:REP 80->322|1e63A|7e-40|19.0|242/295| RP:PFM:NREP 3 RP:PFM:REP 12->76|PF00111|4e-05|30.2|63/71|Fer2| RP:PFM:REP 110->191|PF00970|3e-09|38.3|81/99|FAD_binding_6| RP:PFM:REP 201->300|PF00175|1e-11|32.0|100/107|NAD_binding_1| HM:PFM:NREP 3 HM:PFM:REP 200->302|PF00175|9.3e-26|27.5|102/109|NAD_binding_1| HM:PFM:REP 99->189|PF00970|2e-22|34.4|90/99|FAD_binding_6| HM:PFM:REP 7->76|PF00111|2.5e-14|35.3|68/77|Fer2| GO:PFM:NREP 6 GO:PFM GO:0009055|"GO:electron carrier activity"|PF00111|IPR001041| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF00111|IPR001041| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00970|IPR008333| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00970|IPR008333| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00175|IPR001433| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00175|IPR001433| RP:SCP:NREP 3 RP:SCP:REP 5->91|1a70A|2e-18|31.0|87/97|d.15.4.1| RP:SCP:REP 94->187|1tvcA1|1e-16|27.7|94/109|b.43.4.2| RP:SCP:REP 191->323|1krhA2|1e-23|25.8|132/133|c.25.1.2| HM:SCP:REP 1->81|1doiA_|7.6e-17|34.6|81/128|d.15.4.1|1/1|2Fe-2S ferredoxin-like| HM:SCP:REP 94->190|1krhA1|2.9e-22|37.1|97/100|b.43.4.2|1/1|Riboflavin synthase domain-like| HM:SCP:REP 191->323|1qfjA2|1.9e-33|28.6|133/0|c.25.1.1|1/1|Ferredoxin reductase-like, C-terminal NADP-linked domain| OP:NHOMO 863 OP:NHOMOORG 436 OP:PATTERN ---------------------------1-2--------------1--------------------1-- 111-2--1111---11122-22--2322222122224374--1---------11------423-21222-------------------------11----21-111-2----------------------1----1-------------------------------------------------1-------111111111-111111-111--111---11--------------------------11-------------------------------------------------------------------------1----------1-1------------1------------1-----------12--------12437------------------2--13-12-1----111---111---13-----11-11-11--------3--------------------------------------1---143233333334333333363333125562646114434524115311411421111122222222111661-111-----1-------1-------2-11-------------------------1-333233413322543333234333343343581-1-211------11111111111111111-1111111111111111113333212322122122122122221211111111-233333333333--13-----3444342231111111111111112222212121715445253333442412121111111123433233234343311-1111111----1---11--------------1-------------------------1-111-1------ --------------1----------------------------1--------------------1-----1---111111-22-13------------------1----------------------------------------------------------3---------1-1-----------11-----2112- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 328 STR:RPRED 99.4 SQ:SECSTR HHHcEEETTEEEEEEEETTcEEHHHHHHHTccccccccHHHHHHHGGGcccHHHHHHHHHHHHcHHHHTGGGTccHHHHccccccccTTccEEEEEEEEEEcccTTccccEEEEEEETcTTccccccTTcEEEEEcccccEEEEccccTTTTTEEEEEEcccEEcHHHHHHHTccTTcEEEEEEEEccccccccccEEEEEEEGGGHHHHHHHHHHHHcccccccEEEEEEEccGGGTHHHHHHHHHHcTTTEEEEEEETTTcccTTcccccHHHHHHHTHHHHTTEEEEEEEcTTcHHHHHHHHHHHHHTTTccHHHHHHHHcEEEE## DISOP:02AL 324-331| PSIPRED cEEEEEEEEccEEEEEccccHHHHHHHHccccccccccccccccEEEEEEccEEEcccccccccccEEEEEEEEccccccEEccccccccccccEEEEEEEEEEEEccccEEEEEEEcccccccccccccEEEEEcccccEEEEEcccccccEEEEEEEEEcccHHHHHHHHHcccccEEEEEEcccccEEcccccEEEEEEccHHHHHHHHHHHHHHHccccccEEEEEEEccHHHHHHHHHHHHHHHcccEEEEEEEcccccccccccccccHHHHHHcccccccEEEEEccHHHHHHHHHHHHHccccHHHEEEEEEEccccccccc //