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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF69734.1
DDBJ      :             polysaccharide deacetylase domain protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  321/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.6.2
:409 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   170->387 3cl6A PDBj 4e-20 10.7 %
:RPS:SCOP  144->403 2b5dX2  c.6.2.4 * 4e-21 11.1 %
:HMM:SCOP  189->389 1ny1A_ c.6.2.3 * 6e-28 27.4 %
:RPS:PFM   230->365 PF01522 * Polysacc_deac_1 1e-15 42.5 %
:HMM:PFM   228->366 PF01522 * Polysacc_deac_1 1.9e-22 28.0 118/124  
:BLT:SWISS 1->409 YADE_ECOLI 0.0 81.7 %
:TM

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF69734.1 GT:GENE ACF69734.1 GT:PRODUCT polysaccharide deacetylase domain protein GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 210214..211443 GB:FROM 210214 GB:TO 211443 GB:DIRECTION + GB:PRODUCT polysaccharide deacetylase domain protein GB:NOTE identified by match to protein family HMM PF01522 GB:PROTEIN_ID ACF69734.1 GB:DB_XREF GI:194409515 LENGTH 409 SQ:AASEQ MVMRVVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYYAFKFGFGVGFIDKGHLESVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYNAPDISSAPFGVLVDNLRYPIISKLQGRLHQTWYQIRIGDRLAYVSAMDAQEDNGIPILTYHHILRDEENTRFRHTSTTTSVRAFSNQMTWLRDRGYATLTMYQLEDYIHNRANFPARAVVITFDDGLKSVSRYAYPVLKQYGMKATAFIISSRIKRHPQTWNPRSLQFMSVSELRKISDVFDFQSHTHFLHRVDGHRRPILYSRSYHNILFDFERSRRALTQFTPHVFYLSYPFGGYNATAIKAAKDAGFHLAVTTVRGKVKPGDNPMLLKRLYILRTDSLETMSRLIVNQPQG GT:EXON 1|1-409:0| BL:SWS:NREP 1 BL:SWS:REP 1->409|YADE_ECOLI|0.0|81.7|409/409| TM:NTM 2 TM:REGION 3->24| TM:REGION 52->74| RP:PDB:NREP 1 RP:PDB:REP 170->387|3cl6A|4e-20|10.7|197/302| RP:PFM:NREP 1 RP:PFM:REP 230->365|PF01522|1e-15|42.5|113/123|Polysacc_deac_1| HM:PFM:NREP 1 HM:PFM:REP 228->366|PF01522|1.9e-22|28.0|118/124|Polysacc_deac_1| GO:PFM:NREP 2 GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF01522|IPR002509| GO:PFM GO:0016810|"GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"|PF01522|IPR002509| RP:SCP:NREP 1 RP:SCP:REP 144->403|2b5dX2|4e-21|11.1|226/404|c.6.2.4| HM:SCP:REP 189->389|1ny1A_|6e-28|27.4|179/0|c.6.2.3|1/1|Glycoside hydrolase/deacetylase| OP:NHOMO 432 OP:NHOMOORG 321 OP:PATTERN -------------------------------------------------------------------- ----------1--------------1-------111-------------------------------11------------1--1111-------------1-------1----------------------------------111--1----------------1---------------------112--1-------2---------1111---1-11---------13111111111111111--1-------------11-----1----222---1111111-----------1111111111111-11111111-1--3211111112121-112111-2---1--1-11111--121--11-3-11-----------------------11111111111---------11--1-------1--------------1------------------------------------------------1-----122211--2---1111222-1111-111-2-----111-------11---1-1----------------11----1--1-----1-1111321---1----11-2122-------1-------11-1-11-----1-1---11111-1111111111111--------------1--11-2232221252-322211213332122222322211---212222221222222211132112--223123223222---2-----------2-1111111---------11111------1--------------------------1---111-11-----221----1112222------2222----------------------------------------1-----1-1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 232 STR:RPRED 56.7 SQ:SECSTR #########################################################################################################################################################################ccccccTTTTccccGGGccEEEEEEEEEcTTccccGGGTcccccccccccTTcccccTccccHHHHHHHHHHHHTHHHHHHHHHHHTTcccEEEEcHHHHHHcHHHHHHccEEEEcGGGHHHHHTTcEEEEcccccccEccccccccTTccHHHHHHHHHHHHHHHHHHHccccEEccccccTTHHHHHHHHccccEEcccccccccEEccccTTcccHHHcTTcEEEEEcc######## DISOP:02AL 1-1,84-93,407-410| PSIPRED cHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccEEEEEcccccccEEEEEEEEEEEEEEEccccEEEEcccHHHHHHHHHHHHHcccccccccccccEEEEEccccccccccccccHHHHHHHHcccccHHHccccccEEEEEEEccHHHHHHccccccccEEEEEEEEEcccccccccccccccEEcHHHHHHHHHHHHHcccEEccHHHHHHHHHccccccccEEEEEEcccccccHHHHHHHHHHccccEEEEEcccccccccccccccccccccHHHHHHHHccEEEEEEcccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHcccEEEEEEccEEccccccHHHcEEEEEcccccHHHHHHHHcccccc //