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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF69823.1
DDBJ      :             putative periplasmic protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.118.1a.118.8a.7.14
:444 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   204->300 2axzB PDBj 4e-06 8.4 %
:RPS:SCOP  18->261 1f59A  a.118.1.1 * 4e-04 11.5 %
:RPS:SCOP  233->306 1wfdA  a.7.14.1 * 1e-04 7.6 %
:HMM:SCOP  223->411 2fbnA1 a.118.8.1 * 1.7e-07 25.9 %
:HMM:PFM   235->263 PF07719 * TPR_2 2.9e-05 27.6 29/34  
:HMM:PFM   143->173 PF07691 * PA14 0.00027 19.4 31/145  
:BLT:SWISS 233->441 NPHP3_XENLA 5e-07 21.5 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF69823.1 GT:GENE ACF69823.1 GT:PRODUCT putative periplasmic protein GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 1318990..1320324 GB:FROM 1318990 GB:TO 1320324 GB:DIRECTION + GB:PRODUCT putative periplasmic protein GB:NOTE identified by match to protein family HMM PF07719 GB:PROTEIN_ID ACF69823.1 GB:DB_XREF GI:194409604 LENGTH 444 SQ:AASEQ MLRIVVKRFIIYGGIFSAINFSAWSAEYTPSWSQRQQQSAACFMTGDETCMTFIDDAVRLASRQYGKRSIQLVRSLLLQSDIYQWLGKPELTPQMLLRARAIMKTFPAGTYPGDRADMFEHLAAFYVYSDDRHIEYSSTEQWRYEIKVDYRQRIAWQEQALTWRLKDKKASTEALVYTLNRMRDAYSDALEERDVECDSARKAYYLAKIDATERQWLNVILRDKTWDNRERVASFLQQKADIAYNAGHISEAINALSQALKIEQTLYGAEFGEMTVDSNNLAGFYAQGHHYKEAKDLYLKLIAYYQSRLTPMATVISRLRFYLPENIDLDSTSPYLPLLAEYKRRQSDVSMVLYGISLLYQSNQELEQAKDFAERAFTLDAVAYPAKMQYERLQQLANIAEGLGDNVVARRYRQMSFRHRMAHSIYPGDPQYNDFAKPGGDRCG GT:EXON 1|1-444:0| BL:SWS:NREP 1 BL:SWS:REP 233->441|NPHP3_XENLA|5e-07|21.5|209/1300| RP:PDB:NREP 1 RP:PDB:REP 204->300|2axzB|4e-06|8.4|95/299| HM:PFM:NREP 2 HM:PFM:REP 235->263|PF07719|2.9e-05|27.6|29/34|TPR_2| HM:PFM:REP 143->173|PF07691|0.00027|19.4|31/145|PA14| RP:SCP:NREP 2 RP:SCP:REP 18->261|1f59A|4e-04|11.5|243/440|a.118.1.1| RP:SCP:REP 233->306|1wfdA|1e-04|7.6|66/93|a.7.14.1| HM:SCP:REP 223->411|2fbnA1|1.7e-07|25.9|139/0|a.118.8.1|1/1|TPR-like| OP:NHOMO 14 OP:NHOMOORG 14 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-111-1111111111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 294 STR:RPRED 66.2 SQ:SECSTR ###############################################################################################################################################HHHTTcHHHHHHHHHHHHHHHHHHHcTTcHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTcTcHHHHHHHHHHHHHHTTcTTccccHHHHHHHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHTTccccccccccEccHHHHHcccccccccHHHHHHHHHHTTcccccccccccTTHHHHTTccHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHccTTcHHHHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHcTTTccGGGHHHHHH####### DISOP:02AL 1-1,438-445| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcHHcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHcccccccccccccccccccc //